RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TMCO5AQ8N6Q1 288 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 VPS37AQ8NEZ2 397 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 RAB3IL1Q8TBN0 382 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 NRGNQ92686 78 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 TLCD1Q96CP7 247 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 NPAS1Q99742 590 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 KLHDC3Q9BQ90 382 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 POLDIP3Q9BY77 421 aaKnown RBP9.15□□□□□ -0.94
SF3A3-204ENST00000462258 HOXD1Q9GZZ0 328 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 CLEC4MQ9H2X3 399 aaPredicted RBP9.15□□□□□ -0.94
SF3A3-204ENST00000462258 TMEM185BQ9H7F4 350 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 RNF122Q9H9V4 155 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 TMBIM4Q9HC24 238 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 RASSF1Q9NS23 344 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 AIG1Q9NVV5 245 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 THAP1Q9NVV9 213 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 PCDHGB4Q9UN71 923 aa9.15□□□□□ -0.94
SF3A3-204ENST00000462258 SPG11Q96JI7 2443 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 F8P00451 2351 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 HEATR5AQ86XA9 2040 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 GOLGA8QA0A0J9YX86 632 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 PRSS51A0A1B0GVH4 220 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 GOLGA8OA6NCC3 632 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 DUXAA6NLW8 204 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 TRPC5OSA6NMA1 111 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 A8MXE2 369 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 NPIPB9F8W1W9 429 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 GOLGA8NF8WBI6 632 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 MSTNO14793 375 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 HDAC3O15379 428 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 OIP5O43482 229 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 SCN2BO60939 215 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 CPSF4O95639 269 aaKnown RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 NUDT14O95848 222 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 LINGO3P0C6S8 592 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 KITP10721 976 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 UBL4AP11441 157 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 ME2P23368 584 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 PSMA4P25789 261 aaKnown RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 ELK4P28324 431 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 EPHA3P29320 983 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 KHKP50053 298 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 P2RX1P51575 399 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 CCR4P51679 360 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 NME5P56597 212 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 FGFBP1Q14512 234 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 CTU2Q2VPK5 515 aaKnown RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 NDUFAF6Q330K2 333 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 KLHL26Q53HC5 615 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 PDZK1Q5T2W1 519 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 TNFAIP8L2Q6P589 184 aaPredicted RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 CBLN3Q6UW01 205 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 C16orf62Q7Z3J2 963 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 CHDHQ8NE62 594 aaPredicted RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 OR10D3Q8NH80 312 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 LINC01560Q8TB33 94 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 POC1BQ8TC44 478 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 STARD4Q96DR4 205 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 ADGRG7Q96K78 797 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 KLHL15Q96M94 604 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 SDF2Q99470 211 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 NMUR2Q9GZQ4 415 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF350Q9GZX5 532 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 OR51I1Q9H343 314 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 EXD2Q9NVH0 621 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 PAQR5Q9NXK6 330 aaPredicted RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 MCTS1Q9ULC4 181 aaKnown RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 ICAM5Q9UMF0 924 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 CARD8Q9Y2G2 431 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 DTNAQ9Y4J8 743 aa9.14□□□□□ -0.95
SF3A3-204ENST00000462258 TEP1Q99973 2627 aaKnown RBP9.14□□□□□ -0.95
SF3A3-204ENST00000462258 UQCRHLA0A096LP55 91 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 CENPVL1A0A0U1RR11 272 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 FAM221AA4D161 298 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 SH3D21A4FU49 640 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 C9JVG2 144 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 SLCO1B7G3V0H7 640 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 GTPBP1O00178 669 aaKnown RBP9.13□□□□□ -0.95
SF3A3-204ENST00000462258 TNFSF11O14788 317 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 CXCL13O43927 109 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 KIAA0513O60268 411 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 STX11O75558 287 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 AQP8O94778 261 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 AGR2O95994 175 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 OPN1LWP04000 364 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 EPXP11678 715 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 IL11P20809 199 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 UQCRC2P22695 453 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 DNAJA1P31689 397 aaKnown RBP9.13□□□□□ -0.95
SF3A3-204ENST00000462258 S100A3P33764 101 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 SFTPDP35247 375 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 CHI3L1P36222 383 aaPredicted RBP9.13□□□□□ -0.95
SF3A3-204ENST00000462258 EIF1P41567 113 aaKnown RBP9.13□□□□□ -0.95
SF3A3-204ENST00000462258 KIR2DL2P43627 348 aaPredicted RBP9.13□□□□□ -0.95
SF3A3-204ENST00000462258 CASP9P55211 416 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 UFM1P61960 85 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 RAC1P63000 192 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 PHC1P78364 1004 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 HPCAP84074 193 aa9.13□□□□□ -0.95
SF3A3-204ENST00000462258 CASP8Q14790 479 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms