RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 A0A075B6Q4 140 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 CASKO14936 926 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 FABP7O15540 132 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 DNAJB6O75190 326 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 FCER2P06734 321 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 CDH11P55287 796 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 PCBP4P57723 403 aaKnown RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 TRAM2Q15035 370 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 MZT2BQ6NZ67 158 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 OR6C4Q8NGE1 309 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 CPNE7Q9UBL6 633 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 DIMT1Q9UNQ2 313 aaKnown RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 CMAHPQ9Y471 501 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 V9GYH0 126 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 ABCA7Q8IZY2 2146 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 TMEM229AB2RXF0 380 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 C4orf51C9J302 202 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 HYAL3O43820 417 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 PRKNO60260 465 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 HPGDP15428 266 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 CELP19835 753 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 MAP2K3P46734 347 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 ARL4DP49703 201 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 TPMTP51580 245 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 POMZP3Q6PJE2 187 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 PRSS41Q7RTY9 318 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 NKAIN4Q8IVV8 208 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 FAM160A2Q8N612 972 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF655Q8N720 491 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 OR4C15Q8NGM1 316 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 USB1Q9BQ65 265 aaKnown RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 SAP130Q9H0E3 1048 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 GALNT9Q9HCQ5 603 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 IFT46Q9NQC8 304 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 KLHL1Q9NR64 748 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 HCN3Q9P1Z3 774 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 AP1M2Q9Y6Q5 423 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 SPAG17Q6Q759 2223 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 A0A0A6YYD5 115 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 H0YGG7 62 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 PLOD3O60568 738 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 SEMA4FO95754 770 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 TNFP01375 233 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 F3P13726 295 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 MAP2K6P52564 334 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 ARF3P61204 181 aaPredicted RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 RPS15AP62244 130 aaKnown RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 SRSF5Q13243 272 aaKnown RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 PRICKLE2Q7Z3G6 844 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 OR52L1Q8NGH7 329 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 OR51G2Q8NGK0 314 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 C9orf43Q8TAL5 461 aaPredicted RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 TBC1D20Q96BZ9 403 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 RNFT2Q96EX2 444 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 FANCFQ9NPI8 374 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 CLEC4AQ9UMR7 237 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 KLK4Q9Y5K2 254 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 KNTC1P50748 2209 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 A0A087WUU8 490 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 A0A0G2JPF8 293 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 HNRNPCL3B7ZW38 293 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 SEMG1P04279 462 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 CSF3P09919 207 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 HNRNPCL4P0DMR1 293 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 NDUFV2P19404 249 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 KIR2DL1P43626 348 aaPredicted RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 EEF1A2Q05639 463 aaKnown RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 NFATC4Q14934 902 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 GRK1Q15835 563 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 ABHD13Q7L211 337 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 OR13H1Q8NG92 308 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 GIMAP5Q96F15 307 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 ACTRT3Q9BYD9 372 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 OBP2AQ9NY56 170 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 CALML5Q9NZT1 146 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 PTGFRNQ9P2B2 879 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 GMEB2Q9UKD1 530 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 SLC17A4Q9Y2C5 497 aa14.37□□□□□ -0.11
LMNB1-203ENST00000460265 GPR55Q9Y2T6 319 aaPredicted RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 MDC1Q14676 2089 aaKnown RBP14.37□□□□□ -0.11
LMNB1-203ENST00000460265 PRAMEF27A3QJZ7 478 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 GPR89AB7ZAQ6 455 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 GPR89BP0CG08 455 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 UGT2B7P16662 529 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 AHRP35869 848 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 CAV3P56539 151 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 RRAS2P62070 204 aaPredicted RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 GRM7Q14831 915 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ENTPD8Q5MY95 495 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 IFT27Q9BW83 186 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 SLC7A7Q9UM01 511 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ASB4Q9Y574 426 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 LRRTM2O43300 516 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ORC5O43913 435 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 RDH16O75452 317 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 MRPL3P09001 348 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms