RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CTU2Q2VPK5 515 aaKnown RBP17■□□□□ 0.31
COL5A1-203ENST00000460264 C6orf120Q7Z4R8 191 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 BTLAQ7Z6A9 289 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 ANKRD46Q86W74 232 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 HEATR5AQ86XA9 2040 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 WDR75Q8IWA0 830 aaKnown RBP17■□□□□ 0.31
COL5A1-203ENST00000460264 OR4A15Q8NGL6 344 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 POC1BQ8TC44 478 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 MGARPQ8TDB4 240 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 ADGRG7Q96K78 797 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 SLC35G5Q96KT7 338 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 H3BNH8 94 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SDHDO14521 159 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SNNO75324 88 aaPredicted RBP16.99■□□□□ 0.31
COL5A1-203ENST00000460264 ERLIN1O75477 346 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 AQP8O94778 261 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 ALDOCP09972 364 aaKnown RBP16.99■□□□□ 0.31
COL5A1-203ENST00000460264 EIF1AXP47813 144 aaKnown RBP16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SLC6A8P48029 635 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 CLNS1AP54105 237 aaKnown RBP16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SLC18A1P54219 525 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SUMO3P55854 103 aaPredicted RBP16.99■□□□□ 0.31
COL5A1-203ENST00000460264 RAC1P63000 192 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 FOXF1Q12946 379 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 DPY19L1Q2PZI1 675 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SPANXN4Q5MJ08 99 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 CBLN3Q6UW01 205 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SPNS3Q6ZMD2 512 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 CDC20BQ86Y33 519 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 CHDHQ8NE62 594 aaPredicted RBP16.99■□□□□ 0.31
COL5A1-203ENST00000460264 OR10D3Q8NH80 312 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 SDF2Q99470 211 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 TMEM185BQ9H7F4 350 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 THAP1Q9NVV9 213 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 ICAM5Q9UMF0 924 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 PCDHGB4Q9UN71 923 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 CARD8Q9Y2G2 431 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 DTNAQ9Y4J8 743 aa16.99■□□□□ 0.31
COL5A1-203ENST00000460264 PRSS51A0A1B0GVH4 220 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 DUXAA6NLW8 204 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 E9PBE3 544 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 ADAMDEC1O15204 470 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 AK1P00568 194 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 OPN1LWP04000 364 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 IL11P20809 199 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 MATN1P21941 496 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 EIF1P41567 113 aaKnown RBP16.98■□□□□ 0.31
COL5A1-203ENST00000460264 MAGOHP61326 146 aaKnown RBP16.98■□□□□ 0.31
COL5A1-203ENST00000460264 FGFBP1Q14512 234 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 NDUFAF6Q330K2 333 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 FAM174BQ3ZCQ3 159 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 BEND6Q5SZJ8 279 aaPredicted RBP16.98■□□□□ 0.31
COL5A1-203ENST00000460264 ANXA8L1Q5VT79 327 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 ZNF614Q8N883 585 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 TLCD1Q96CP7 247 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 TEX37Q96LM6 180 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 DACH2Q96NX9 599 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 NMUR2Q9GZQ4 415 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 OPN3Q9H1Y3 402 aaPredicted RBP16.98■□□□□ 0.31
COL5A1-203ENST00000460264 LIME1Q9H400 295 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 AIG1Q9NVV5 245 aa16.98■□□□□ 0.31
COL5A1-203ENST00000460264 MED13LQ71F56 2210 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ITPR3Q14573 2671 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 SH3D21A4FU49 640 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 HDAC3O15379 428 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 GOSR1O95249 250 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 NUDT14O95848 222 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 CGAP01215 116 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 UQCRC2P22695 453 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ME2P23368 584 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ELK4P28324 431 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 PCYT1AP49585 367 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 P2RX1P51575 399 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 CASP8Q14790 479 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 PDZK1Q5T2W1 519 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 HEPHL1Q6MZM0 1159 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 PPP4R4Q6NUP7 873 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ZNF474Q6S9Z5 364 aaPredicted RBP16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ESPNLQ6ZVH7 1005 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 VPS37AQ8NEZ2 397 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 OR2V1Q8NHB1 315 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 RAB3IL1Q8TBN0 382 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 NINJ1Q92982 152 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ZNF350Q9GZX5 532 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 OR51I1Q9H343 314 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 TMBIM4Q9HC24 238 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 PAQR5Q9NXK6 330 aaPredicted RBP16.97■□□□□ 0.31
COL5A1-203ENST00000460264 MARCOQ9UEW3 520 aaPredicted RBP16.97■□□□□ 0.31
COL5A1-203ENST00000460264 ST6GALNAC2Q9UJ37 374 aa16.97■□□□□ 0.31
COL5A1-203ENST00000460264 MAP1AP78559 2803 aaPredicted RBP16.97■□□□□ 0.31
COL5A1-203ENST00000460264 A0A0J9YW62 118 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 GTPBP1O00178 669 aaKnown RBP16.96■□□□□ 0.31
COL5A1-203ENST00000460264 TNFSF11O14788 317 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CXCL13O43927 109 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 FCMRO60667 390 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 STX11O75558 287 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CPSF4O95639 269 aaKnown RBP16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CD8BP10966 210 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 UBL4AP11441 157 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms