RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GMPR2Q9P2T1 348 aaKnown RBP5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 RHCGQ9UBD6 479 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 FBXL4Q9UKA2 621 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC7A7Q9UM01 511 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 PPIEQ9UNP9 301 aaKnown RBP5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 POLHQ9Y253 713 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 LRRC42Q9Y546 428 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 PCDHGB6Q9Y5F9 930 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 PCDHGA6Q9Y5G7 932 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 DSPPQ9NZW4 1301 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 SDK2Q58EX2 2172 aa5.38□□□□□ -1.55
RNU1-88P-201ENST00000459274 MAGEA13PA6NCF6 341 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 GJE1A6NN92 205 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ALG1L2C9J202 215 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 KLRC4-KLRK1H3BQV0 150 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 TGFBR3LH3BV60 316 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 M0R3H8 397 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 PDLIM1O00151 329 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 HRKO00198 91 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 SCO2O43819 266 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 CDC40O60508 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 DIRAS1O95057 198 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 RCBTB2O95199 551 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 TNFAIP8O95379 198 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ADAP00813 363 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 RPSAP08865 295 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 SAGP10523 405 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 COX6A1P12074 109 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 CYP4B1P13584 511 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 EEF1B2P24534 225 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ELAVL4P26378 380 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 POU1F1P28069 291 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 EVI2BP34910 448 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 CAPGP40121 348 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 MAP3K8P41279 467 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 RBM34P42696 430 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 IDH2P48735 452 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 HMGA2P52926 109 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ESRRGP62508 458 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 SNRPNP63162 240 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 TOP3AQ13472 1001 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 PIN1Q13526 163 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 PCOLCEQ15113 449 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR1Q1Q15612 314 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 EXOC3L2Q2M3D2 409 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 KLHL26Q53HC5 615 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 LCN10Q6JVE6 187 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 KIRREL2Q6UWL6 708 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF605Q86T29 641 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 C10orf111Q8N326 155 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 FAM86B1Q8N7N1 296 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 AQP11Q8NBQ7 271 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 APCDD1LQ8NCL9 501 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR4N2Q8NGD1 307 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR6T1Q8NGN1 323 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR1J4Q8NGS1 313 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR4C3Q8NH37 302 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 SNIP1Q8TAD8 396 aaKnown RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ELP5Q8TE02 316 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ACOT11Q8WXI4 607 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 OSTF1Q92882 214 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 FGF11Q92914 225 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 NKD1Q969G9 470 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 DDIT4LQ96D03 193 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 C7orf34Q96L11 122 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 JSRP1Q96MG2 331 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 C5orf34Q96MH7 638 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 NR1H4Q96RI1 486 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 FEVQ99581 238 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ARHGDIGQ99819 225 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 TAPBPLQ9BX59 468 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 DPH1Q9BZG8 443 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 UCK2Q9BZX2 261 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 ADNPQ9H2P0 1102 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 RIBC2Q9H4K1 309 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 RLIMQ9NVW2 624 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 USE1Q9NZ43 259 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 FOXJ2Q9P0K8 574 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 SCOCQ9UIL1 159 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 BOKQ9UMX3 212 aaPredicted RBP5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 NEUROG3Q9Y4Z2 214 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 GMPPBQ9Y5P6 360 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 LYVE1Q9Y5Y7 322 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 HS3ST3B1Q9Y662 390 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 AP4B1Q9Y6B7 739 aa5.37□□□□□ -1.55
RNU1-88P-201ENST00000459274 NPIPA5A0A0B4J1W7 369 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DCDC2BA2VCK2 349 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TRABD2BA6NFA1 517 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 PRAMEF25A6NGN4 478 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CDRT15L2A8MXV6 281 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 NPIPA7E9PJI5 369 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ACOT7O00154 380 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SOCS2O14508 198 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 SOCS6O14544 535 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 DENRO43583 198 aaKnown RBP5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 CHP2O43745 196 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR2T1O43869 369 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 TSPAN2O60636 221 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 HCN1O60741 890 aa5.36□□□□□ -1.55
RNU1-88P-201ENST00000459274 ICOSLGO75144 302 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms