RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PNLIPRP2P54317 469 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ATP12AP54707 1039 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CLDN2P57739 230 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR12D2P58182 307 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ACTR1AP61163 376 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CDK5Q00535 292 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SNTB2Q13425 540 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CD276Q5ZPR3 534 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 BICRALQ6AI39 1079 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 HSDL2Q6YN16 418 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM129CQ86XR2 697 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CDH26Q8IXH8 852 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RBFAQ8N0V3 343 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR8J1Q8NGP2 316 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR10AC1Q8NH08 325 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 DOK4Q8TEW6 326 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RHOVQ96L33 236 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 KCTD7Q96MP8 289 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TREX2Q9BQ50 279 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SPON2Q9BUD6 331 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PCDHB10Q9UN67 800 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MYO16Q9Y6X6 1858 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CSMD3Q7Z407 3707 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 C5orf52A6NGY3 159 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MSGN1A6NI15 193 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC28A1O00337 649 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PRAMEF11O60813 436 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SDC3O75056 442 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SOX30O94993 753 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 WISP1O95388 367 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SFTPBP07988 381 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 F3P13726 295 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RAB3BP20337 219 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FPR3P25089 353 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MAOBP27338 520 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR1E1P30953 314 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SOX6P35712 828 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ACVR1BP36896 505 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MTNR1BP49286 362 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RAB13P51153 203 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SNRPGP62308 76 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 LCN1P1Q5VSP4 162 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FRG2Q64ET8 278 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 AFTPHQ6ULP2 937 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CYB561A3Q8NBI2 242 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR5M3Q8NGP4 307 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 GANCQ8TET4 914 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FUBP3Q96I24 572 aaKnown RBP eCLIP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 UROC1Q96N76 676 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FRG2BQ96QU4 278 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CDCA7Q9BWT1 371 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 GPR174Q9BXC1 333 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ARL6Q9H0F7 186 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR10A4Q9H209 315 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 DDX31Q9H8H2 851 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ABCC13Q9NSE7 274 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SIRT3Q9NTG7 399 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ACAD8Q9UKU7 415 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 MPTX1A8MV57 137 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 H7C0S8 307 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 PRICKLE3O43900 615 aaPredicted RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 FGF19O95750 216 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 IL18BPO95998 194 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 PIPP12273 146 aaPredicted RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 OSMP13725 252 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 PRG2P13727 222 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 OGNP20774 298 aaKnown RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 PDHA2P29803 388 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 ACSL1P33121 698 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 MTNR1AP48039 350 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 GDI2P50395 445 aaKnown RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 UBE2IP63279 158 aaKnown RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 CDK6Q00534 326 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 DEFA5Q01523 94 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 EFEMP1Q12805 493 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 CHIT1Q13231 466 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 VGLL4Q14135 290 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 OR7A5Q15622 319 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 COL28A1Q2UY09 1125 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM69AQ5T7M9 428 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 GFI1BQ5VTD9 330 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 MRM1Q6IN84 353 aaKnown RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 KIAA1161Q6NSJ0 714 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM205Q6UW68 189 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 GLT6D1Q7Z4J2 308 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 LAPTM4BQ86VI4 370 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 ARRDC1Q8N5I2 433 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 MISP3Q96FF7 219 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 RPRD1AQ96P16 312 aaPredicted RBP4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 MACROD1Q9BQ69 325 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 FOLH1BQ9HBA9 442 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 C20orf141Q9NUB4 165 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 ASIC5Q9NY37 505 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 SSR3Q9UNL2 185 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 PCDHB1Q9Y5F3 818 aa4.21□□□□□ -1.73
DEPDC1-202ENST00000456315 GLYATL1P3A0A0U1RQE8 302 aa4.21□□□□□ -1.74
DEPDC1-202ENST00000456315 TRDV1A0A1B0GX56 115 aa4.21□□□□□ -1.74
DEPDC1-202ENST00000456315 MBLAC1A4D2B0 266 aaPredicted RBP4.21□□□□□ -1.74
DEPDC1-202ENST00000456315 H3BSH0 61 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms