RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SH3YL1Q96HL8 342 aaPredicted RBP17.42■□□□□ 0.38
USP40-207ENST00000450940 NUF2Q9BZD4 464 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 SERHL2Q9H4I8 314 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 PNPOQ9NVS9 261 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 PAQR5Q9NXK6 330 aaPredicted RBP17.42■□□□□ 0.38
USP40-207ENST00000450940 ITPR3Q14573 2671 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 OIP5O43482 229 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 AQP8O94778 261 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 CD8BP10966 210 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 MATN1P21941 496 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 EIF1P41567 113 aaKnown RBP17.41■□□□□ 0.38
USP40-207ENST00000450940 SUMO3P55854 103 aaPredicted RBP17.41■□□□□ 0.38
USP40-207ENST00000450940 DPY19L1Q2PZI1 675 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 HHATQ5VTY9 493 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 ZNF474Q6S9Z5 364 aaPredicted RBP17.41■□□□□ 0.38
USP40-207ENST00000450940 ESPNLQ6ZVH7 1005 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 CNEP1R1Q8N9A8 125 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 PHOSPHO1Q8TCT1 267 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 SMPDL3BQ92485 455 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 ZBTB9Q96C00 473 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 RNF145Q96MT1 663 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 NMUR2Q9GZQ4 415 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 LIME1Q9H400 295 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 ST6GALNAC2Q9UJ37 374 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 PCDHGB4Q9UN71 923 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 DTNAQ9Y4J8 743 aa17.41■□□□□ 0.38
USP40-207ENST00000450940 TMEM120BA0PK00 339 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 H3BNH8 94 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 EIF1AYO14602 144 aaKnown RBP17.4■□□□□ 0.38
USP40-207ENST00000450940 SNNO75324 88 aaPredicted RBP17.4■□□□□ 0.38
USP40-207ENST00000450940 AK1P00568 194 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 GUSBP08236 651 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 CD1EP15812 388 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 ADH6P28332 368 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 P2RX1P51575 399 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 IST1P53990 364 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 CASP8Q14790 479 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 SGCBQ16585 318 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 ANXA8L1Q5VT79 327 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 CBLN3Q6UW01 205 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 FAM214BQ7L5A3 538 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 OR5D16Q8NGK9 328 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 OR10D3Q8NH80 312 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 CXXC4Q9H2H0 198 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 THAP1Q9NVV9 213 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 ELOVL5Q9NYP7 299 aa17.4■□□□□ 0.38
USP40-207ENST00000450940 NPIPA5A0A0B4J1W7 369 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 A0A0J9YW62 118 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 RNF103-CHMP3A0A140T963 221 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 SH3D21A4FU49 640 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 NPIPA7E9PJI5 369 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ETV2O00321 342 aaPredicted RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 SDHDO14521 159 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 EFNA2O43921 213 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 SMNDC1O75940 238 aaKnown RBP eCLIP17.39■□□□□ 0.37
USP40-207ENST00000450940 NTN1O95631 604 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ALDOCP09972 364 aaKnown RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 NPIPA8P0DM63 369 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 NID1P14543 1247 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 IL11P20809 199 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 UQCRC2P22695 453 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ELK4P28324 431 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 SOAT1P35610 550 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 CD79BP40259 229 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 EIF1AXP47813 144 aaKnown RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 SLC6A8P48029 635 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 CLNS1AP54105 237 aaKnown RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 RPS26P62854 115 aaKnown RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 FAM27E3Q08E93 113 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ZNF141Q15928 474 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ARHGAP11BQ3KRB8 267 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 BEND6Q5SZJ8 279 aaPredicted RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 HEPHL1Q6MZM0 1159 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ANKRD42Q8N9B4 389 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 VPS37AQ8NEZ2 397 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 OR4A15Q8NGL6 344 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 OR2V1Q8NHB1 315 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 RAB3IL1Q8TBN0 382 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 GPR119Q8TDV5 335 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 TLCD1Q96CP7 247 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 ARSGQ96EG1 525 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 FOXC2Q99958 501 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 PAIP2Q9BPZ3 127 aaKnown RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 OPN3Q9H1Y3 402 aaPredicted RBP17.39■□□□□ 0.37
USP40-207ENST00000450940 PLSCR4Q9NRQ2 329 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 NDRG3Q9UGV2 375 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 EDARQ9UNE0 448 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 CARD8Q9Y2G2 431 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 TESMINQ9Y4I5 508 aa17.39■□□□□ 0.37
USP40-207ENST00000450940 HDAC3O15379 428 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 EIF4E2O60573 245 aaKnown RBP17.38■□□□□ 0.37
USP40-207ENST00000450940 DNAJA2O60884 412 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 STX11O75558 287 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 AGR2O95994 175 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 HRGP04196 525 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 ART1P52961 327 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 SIRPAP78324 504 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 SLC25A53Q5H9E4 307 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 SPANXN4Q5MJ08 99 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 SPATA19Q7Z5L4 167 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms