RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 SLC38A1Q9H2H9 487 aa14.23□□□□□ -0.13
TOP3B-211ENST00000449704 MRGBPQ9NV56 204 aa14.23□□□□□ -0.13
TOP3B-211ENST00000449704 MED17Q9NVC6 651 aa14.23□□□□□ -0.13
TOP3B-211ENST00000449704 THUMPD1Q9NXG2 353 aaKnown RBP14.23□□□□□ -0.13
TOP3B-211ENST00000449704 FAM215AQ9Y5M1 114 aa14.23□□□□□ -0.13
TOP3B-211ENST00000449704 HECTD1Q9ULT8 2610 aa14.23□□□□□ -0.13
TOP3B-211ENST00000449704 MED12Q93074 2177 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 A0A087WZY1 265 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 OR2M5A3KFT3 312 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 H0Y3Z8 333 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 ZNF264O43296 627 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 EIF4E2O60573 245 aaKnown RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 CSTAP01040 98 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 BCHEP06276 602 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 NUDT7P0C024 238 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 UBTFL6P0CB48 400 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 UBL4AP11441 157 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 POU3F2P20265 443 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 PPIBP23284 216 aaKnown RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 LSP1P33241 339 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 PTGER4P35408 488 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 LHX2P50458 406 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 CCR4P51679 360 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 NUP107P57740 925 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 FADDQ13158 208 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 NFYCQ13952 458 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 GLYR1Q49A26 553 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 DLEU7Q6UYE1 221 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 SPATA21Q7Z572 469 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 RETREG3Q86VR2 466 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 ZNF808Q8N4W9 903 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 SMPDL3BQ92485 455 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 RND1Q92730 232 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 TTYH2Q9BSA4 534 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 NSRP1Q9H0G5 558 aaKnown RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 MTHFD2LQ9H903 347 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-211ENST00000449704 ZNF337Q9Y3M9 751 aa14.22□□□□□ -0.13
TOP3B-211ENST00000449704 NCKAP5O14513 1909 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 PTPN13Q12923 2485 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 GMNCA6NCL1 334 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 EVPLLA8MZ36 301 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 H3BML4 177 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 TFPTP0C1Z6 253 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 GLI4P10075 376 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 CPN1P15169 458 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 P2RX1P51575 399 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 CRISP3P54108 245 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 SF3B4Q15427 424 aaKnown RBP eCLIP14.21□□□□□ -0.136e-17■■■■□ 20.7
TOP3B-211ENST00000449704 PLPPR5Q32ZL2 321 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 MMEL1Q495T6 779 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 ACSF3Q4G176 576 aaPredicted RBP14.21□□□□□ -0.13
TOP3B-211ENST00000449704 XKRXQ6PP77 449 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 CPLX4Q7Z7G2 160 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 UBQLNLQ8IYU4 475 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 DPP10Q8N608 796 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 TOR1AIP2Q8NFQ8 470 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 OR5W2Q8NH69 310 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 SLC38A5Q8WUX1 472 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 SDCCAG3Q96C92 435 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 TMEM19Q96HH6 336 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 TRIB1Q96RU8 372 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 LAT2Q9GZY6 243 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 RUBCNLQ9H714 662 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 COQ3Q9NZJ6 369 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 CALML5Q9NZT1 146 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 ARMCX1Q9P291 453 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 ICAM5Q9UMF0 924 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 L3MBTL1Q9Y468 752 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 CAPN7Q9Y6W3 813 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 PCNX1Q96RV3 2341 aa14.21□□□□□ -0.13
TOP3B-211ENST00000449704 TRBV5-3A0A0A0MS03 114 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 LOC100653049A0A140TA62 436 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 AGAP5A6NIR3 686 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CLDN24A6NM45 220 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 KDM4EB2RXH2 506 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 C5orf58C9J3I9 102 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 LINC01387J3KSC0 135 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 SEC14L5O43304 696 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 KRT34O76011 436 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CLDN1O95832 211 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 PEPDP12955 493 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 DRD4P21917 467 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 SUMO3P55854 103 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CLDN18P56856 261 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 KCNJ10P78508 379 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CBFBQ13951 182 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 GNA13Q14344 377 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 FGFBP1Q14512 234 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 MAPRE2Q15555 327 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 MAPK11Q15759 364 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 BCL2A1Q16548 175 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 RUNDC3AQ59EK9 446 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 RPS26P11Q5JNZ5 115 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 GCNT6Q5T4J0 391 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 AP1ARQ63HQ0 302 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CHMP1BQ7LBR1 199 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 SNX32Q86XE0 403 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CCDC71Q8IV32 467 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 PEX5LQ8IYB4 626 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms