RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 FBXW10Q5XX13 1052 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 OR5M10Q6IEU7 315 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 INO80CQ6PI98 192 aaPredicted RBP13.38□□□□□ -0.27
TNF-208ENST00000449264 CBLN3Q6UW01 205 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 ERMP1Q7Z2K6 904 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 GPALPP1Q8IXQ4 340 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 PAQR8Q8TEZ7 354 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 SGCZQ96LD1 299 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 ZNF300Q96RE9 604 aaPredicted RBP13.38□□□□□ -0.27
TNF-208ENST00000449264 PRR14Q9BWN1 585 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 NDUFAF4Q9P032 175 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 NTNG1Q9Y2I2 539 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 WIF1Q9Y5W5 379 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 PCNX3Q9H6A9 2034 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
TNF-208ENST00000449264 CPSF4LA6NMK7 179 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 TAF4O00268 1085 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 AP3D1O14617 1153 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 CST1P01037 141 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 FCGR1AP12314 374 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ANPEPP15144 967 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ITGA2P17301 1181 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 FASP25445 335 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ADH7P40394 386 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 PTGDSP41222 190 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 UCNP55089 124 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ARG2P78540 354 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SKP2Q13309 424 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 OR1C1Q15619 314 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ZSWIM7Q19AV6 140 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SLC22A10Q63ZE4 541 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 RANBP3LQ86VV4 465 aaPredicted RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 GRAMD2AQ8IUY3 354 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 PSD4Q8NDX1 1056 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 FAM71CQ8NEG0 241 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 DUSP19Q8WTR2 217 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SIGLEC12Q96PQ1 595 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SECISBP2Q96T21 854 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 PKP2Q99959 881 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SEMA6AQ9H2E6 1030 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 RNPEPL1Q9HAU8 725 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 PPP4R1LQ9P1A2 415 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 NKX1-2Q9UD57 310 aaPredicted RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 CNOT11Q9UKZ1 510 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 FAM32AQ9Y421 112 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 GNGT2O14610 69 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ADAM10O14672 748 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ADAM11O75078 769 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SLC25A12O75746 678 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 NUDT14O95848 222 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 P04436 131 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ZNF136P52737 540 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 GAS1P54826 345 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 CXADRP78310 365 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SPIBQ01892 262 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 RIPK1Q13546 671 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ZNF550Q7Z398 422 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 AMIGO2Q86SJ2 522 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 ZNF227Q86WZ6 799 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 MISPQ8IVT2 679 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 LILRA2Q8N149 483 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 PQLC1Q8N2U9 271 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 RNF138Q8WVD3 245 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 MCHR1Q99705 422 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 SACM1LQ9NTJ5 587 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 RHCGQ9UBD6 479 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 TESQ9UGI8 421 aaKnown RBP13.37□□□□□ -0.27
TNF-208ENST00000449264 TESMINQ9Y4I5 508 aa13.37□□□□□ -0.27
TNF-208ENST00000449264 A0A0G2JMM0 328 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 A0A1W2PPB8 328 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 A0A1W2PRS3 328 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 OR5H15A6NDH6 313 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 KIR3DP1A8MWS1 328 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 TPST2O60704 377 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 SEMA7AO75326 666 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 CEACAM4O75871 244 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 NEURL1O76050 574 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 LDLRP01130 860 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
TNF-208ENST00000449264 HTR2AP28223 471 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 MASP1P48740 699 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 TAS2R41P59536 307 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 GPR85P60893 370 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 ATP6AP1Q15904 470 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 COL28A1Q2UY09 1125 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 HMBOX1Q6NT76 420 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 BORAQ6PGQ7 559 aa13.36□□□□□ -0.27
TNF-208ENST00000449264 TSPYL5Q86VY4 417 aaPredicted RBP13.36□□□□□ -0.27
TNF-208ENST00000449264 ZNF440Q8IYI8 595 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms