RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CXorf40AQ8TE69 158 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CA12O43570 354 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 TFPIP10646 304 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ARHGAP1Q07960 439 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SUSD1Q6UWL2 747 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CDCA5Q96FF9 252 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CD84Q9UIB8 345 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 MBP02144 154 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 NT5EP21589 574 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ITPKBP27987 946 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SFXN4Q6P4A7 337 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 UNC5DQ6UXZ4 953 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SLC41A3Q96GZ6 507 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ARNT2Q9HBZ2 717 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CFAP20Q9Y6A4 193 aaKnown RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 M0R3H8 397 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 HSPA12AO43301 675 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ERI3O43414 337 aaKnown RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 CDK2P24941 298 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 XCR1P46094 333 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 B3GNTL1Q67FW5 361 aaPredicted RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 TMEM65Q6PI78 240 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SYNPRQ8TBG9 265 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 MS4A7Q9GZW8 240 aaPredicted RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 OPA3Q9H6K4 179 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 IL26Q9NPH9 171 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 TSPAN12O95859 305 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 HTR1FP30939 366 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CTNNB1P35222 781 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 GLP1RP43220 463 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SOX9P48436 509 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 GPR143P51810 404 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 RBM39Q14498 530 aaKnown RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR4D10Q8NGI6 311 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 BOCQ9BWV1 1114 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CD52P31358 61 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 EPHA5P54756 1037 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 LEXMQ3ZCV2 418 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR10H5Q8NGA6 315 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 MYO7BQ6PIF6 2116 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CACNB4O00305 520 aaPredicted RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 SYN3O14994 580 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 RRASP10301 218 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 KCNJ10P78508 379 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ZNF283Q8N7M2 679 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 PIKFYVEQ9Y2I7 2098 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 A0A0G2JN53 185 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 OR2C1O95371 312 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 CD9P21926 228 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 COX20Q5RI15 118 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 B3GAT2Q9NPZ5 323 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 A0A1B0GUH1 482 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 ADM5C9JUS6 153 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 PAX6P26367 422 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 TP53I3Q53FA7 332 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 PRSS55Q6UWB4 352 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 GHSRQ92847 366 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC35G4P0C7Q5 338 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 MRPS10P82664 201 aaKnown RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 TMEM35AQ53FP2 167 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 TRILQ7L0X0 811 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC12A9Q9BXP2 914 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SHROOM3Q8TF72 1996 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 CHD4Q14839 1912 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SYPP08247 313 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 CNR1P21554 472 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 AKR1C2P52895 323 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 AKR1C1Q04828 323 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 GPR162Q16538 588 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 ITPRIPL2Q3MIP1 535 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 ZNF628Q5EBL2 1059 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 COL13A1Q5TAT6 717 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 PCSK9Q8NBP7 692 aaKnown RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 NTMT1Q9BV86 223 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 C8orf33Q9H7E9 229 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 TAS2R5Q9NYW4 299 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 KLHL42Q9P2K6 505 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 USP3Q9Y6I4 520 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 IFNGR1P15260 489 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 LCN9Q8WX39 176 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC25A44Q96H78 314 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 TMEM41AQ96HV5 264 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 PEAK1Q9H792 1746 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 MEGF11A6BM72 1044 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 ATXN1LP0C7T5 689 aaKnown RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 RAB6AP20340 208 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 TAS2R38P59533 333 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 AMZ2Q86W34 360 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 BRF2Q9HAW0 419 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 FAM212BQ9NTI7 297 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 PURGQ9UJV8 347 aaKnown RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 RAB3DO95716 219 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 DSC1Q08554 894 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 CDCP1Q9H5V8 836 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC38A8A6NNN8 435 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 TPBGQ13641 420 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 BEX5Q5H9J7 111 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms