RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 SLC6A8P48029 635 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 NFYCQ13952 458 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 LARS2Q15031 903 aaKnown RBP11.12□□□□□ -0.63
LTBR-204ENST00000444814 MRGPRGQ86SM5 289 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 LACC1Q8IV20 430 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 ZNF440Q8IYI8 595 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 GATSQ8NAP1 163 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 OR5M9Q8NGP3 310 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 OR10Q1Q8NGQ4 319 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 PNPT1Q8TCS8 783 aaKnown RBP11.12□□□□□ -0.63
LTBR-204ENST00000444814 ZPLD1Q8TCW7 415 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 CA5BP1Q8WTZ4 195 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 CCDC120Q96HB5 630 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 TIMP4Q99727 224 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 SPATA5L1Q9BVQ7 753 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 UGT2B28Q9BY64 529 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 SAP130Q9H0E3 1048 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 PNPLA3Q9NST1 481 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 GID8Q9NWU2 228 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 FLRT3Q9NZU0 649 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 SPRR3Q9UBC9 169 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 MKLN1Q9UL63 735 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 SLC6A5Q9Y345 797 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 IFT52Q9Y366 437 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 PCDHB14Q9Y5E9 798 aa11.12□□□□□ -0.63
LTBR-204ENST00000444814 GPC6Q9Y625 555 aaPredicted RBP11.12□□□□□ -0.63
LTBR-204ENST00000444814 A0A0G2JPF8 293 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 C7orf72A4D263 438 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 WIPF3A6NGB9 483 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 HSPB2A8KAH6 182 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 HNRNPCL2B2RXH8 293 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 HNRNPCL3B7ZW38 293 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 HNRNPCL1O60812 293 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 H6PDO95479 791 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 IL2RAP01589 272 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 HNRNPCL4P0DMR1 293 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ELK4P28324 431 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 CCR4P51679 360 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ART3Q13508 389 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 RGNQ15493 299 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 HSPB2Q16082 182 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 LIN52Q52LA3 116 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.11□□□□□ -0.63
LTBR-204ENST00000444814 PDZK1Q5T2W1 519 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 GCNT6Q5T4J0 391 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 AP1ARQ63HQ0 302 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SPATA21Q7Z572 469 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 FGD2Q7Z6J4 655 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 DHDDSQ86SQ9 333 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 FUNDC1Q8IVP5 155 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SLC30A8Q8IWU4 369 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ULK2Q8IYT8 1036 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 DPP10Q8N608 796 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 OR5W2Q8NH69 310 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 BBS10Q8TAM1 723 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 GIMAP1Q8WWP7 306 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SH3YL1Q96HL8 342 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 ZFP3Q96NJ6 502 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ZNF317Q96PQ6 595 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 PAIP1Q9H074 479 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 SERHL2Q9H4I8 314 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 CALHM2Q9HA72 323 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 CHST11Q9NPF2 352 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 RPH3AQ9Y2J0 694 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 AP3M1Q9Y2T2 418 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SPIN1Q9Y657 262 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 GMEB1Q9Y692 573 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 KCNE3Q9Y6H6 103 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 NPIPB9F8W1W9 429 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ZG16O60844 167 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 CYP7B1O75881 506 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 CAPN3P20807 821 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 FKBP2P26885 142 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 CHRNB4P30926 498 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ZFP36L2P47974 494 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 CASP9P55211 416 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SH3BGRP55822 239 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 GFRA1P56159 465 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
LTBR-204ENST00000444814 RIPPLY2Q5TAB7 128 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 TYW3Q6IPR3 259 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 ZAR1Q86SH2 424 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SNX32Q86XE0 403 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 CHERPQ8IWX8 916 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 BHLHE22Q8NFJ8 381 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 MRGPRX4Q96LA9 322 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 DMRTA2Q96SC8 542 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ZNF385DQ9H6B1 395 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 TIGARQ9NQ88 270 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 FBXO34Q9NWN3 711 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 SLC13A4Q9UKG4 626 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 ANGPT4Q9Y264 503 aa11.11□□□□□ -0.63
LTBR-204ENST00000444814 KLF2Q9Y5W3 355 aaPredicted RBP11.11□□□□□ -0.63
LTBR-204ENST00000444814 EXPH5Q8NEV8 1989 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms