RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 A4GALTQ9NPC4 353 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 GID8Q9NWU2 228 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SLC25A37Q9NYZ2 338 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 VAPAQ9P0L0 249 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SLAMF8Q9P0V8 285 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CAMK2AQ9UQM7 478 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CARD8Q9Y2G2 431 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SLC6A5Q9Y345 797 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 HRH3Q9Y5N1 445 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 PHF3Q92576 2039 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 HIVEP3Q5T1R4 2406 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 PRAMEF27A3QJZ7 478 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 C7orf72A4D263 438 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 WIPF3A6NGB9 483 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 ZNHIT1O43257 154 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 GMFGO60234 142 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 SNX3O60493 162 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 TNFRSF21O75509 655 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 CSTAP01040 98 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 C1QCP02747 245 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 BCHEP06276 602 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 CHRM4P08173 479 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 TFPTP0C1Z6 253 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 IL7RP16871 459 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 GPX2P18283 190 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 AGAP20933 346 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 EIF1P41567 113 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 EEFSECP57772 596 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 KCNJ10P78508 379 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 TRMT5Q32P41 509 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 RUNDC3AQ59EK9 446 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 GCNT6Q5T4J0 391 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 C1orf185Q5T7R7 199 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 XKRXQ6PP77 449 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 B3GNT6Q6ZMB0 384 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 MSRB3Q8IXL7 192 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 ULK2Q8IYT8 1036 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 TMCO5AQ8N6Q1 288 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 ANKFN1Q8N957 763 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 OR5W2Q8NH69 310 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 RP9Q8TA86 221 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 BBS10Q8TAM1 723 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 SLC38A5Q8WUX1 472 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 WDR60Q8WVS4 1066 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 CCDC120Q96HB5 630 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 CGREF1Q99674 301 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 CPPED1Q9BRF8 314 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 THUMPD3Q9BV44 507 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 TMEM38AQ9H6F2 299 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 EXOSC3Q9NQT5 275 aaKnown RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 ALKBH4Q9NXW9 302 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 COQ3Q9NZJ6 369 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 TNFRSF10DQ9UBN6 386 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 PRDM4Q9UKN5 801 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 VDAC3Q9Y277 283 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 RPH3AQ9Y2J0 694 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 IFT52Q9Y366 437 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 L3MBTL1Q9Y468 752 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 AP4B1Q9Y6B7 739 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 ARHGAP21Q5T5U3 1957 aa9.82□□□□□ -0.84
HDAC6-211ENST00000443563 USP9XQ93008 2570 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-211ENST00000443563 LRRK2Q5S007 2527 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 OR2M5A3KFT3 312 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 AGAP5A6NIR3 686 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 C17orf51A8MQB3 221 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 B4DXG7 233 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 MRASO14807 208 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ZIC2O95409 532 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 THBS1P07996 1170 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ARAFP10398 606 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 NID1P14543 1247 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 UQCRBP14927 111 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 PGCP20142 388 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 POU3F2P20265 443 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 RPS4Y1P22090 263 aaKnown RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ME2P23368 584 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ADH6P28332 368 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 SLC6A8P48029 635 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 LHX2P50458 406 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 B3GALT5-AS1P59052 145 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 RBBP4Q09028 425 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 LARS2Q15031 903 aaKnown RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 MAPK14Q16539 360 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 PLPPR5Q32ZL2 321 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 LIN52Q52LA3 116 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 REEP3Q6NUK4 255 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 CHMP1BQ7LBR1 199 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 MTDHQ86UE4 582 aaKnown RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 SNX32Q86XE0 403 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 KRT73Q86Y46 540 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 SLC30A8Q8IWU4 369 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF440Q8IYI8 595 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 GTPBP8Q8N3Z3 284 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF808Q8N4W9 903 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 MEIOBQ8N635 442 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ZPLD1Q8TCW7 415 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 TMEM234Q8WY98 164 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 RND1Q92730 232 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms