RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 FAM215AQ9Y5M1 114 aa13.62□□□□□ -0.23
CSNK1E-210ENST00000442216 DOCK7Q96N67 2140 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ICE1Q9Y2F5 2266 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 DOPEY1Q5JWR5 2465 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 AGAP5A6NIR3 686 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 BBIP1A8MTZ0 92 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 EVPLLA8MZ36 301 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 CCDC22O60826 627 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 DNAJA2O60884 412 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 TNFRSF21O75509 655 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 EPPINO95925 133 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 NPPAP01160 153 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 CHRM4P08173 479 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 RNF224P0DH78 156 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 UBL4AP11441 157 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 CD1EP15812 388 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ZNF708P17019 499 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 GPX2P18283 190 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 RPS4Y1P22090 263 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ADH6P28332 368 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 LSP1P33241 339 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 EIF1P41567 113 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 LHX2P50458 406 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 CHRNEQ04844 493 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 KLF10Q13118 480 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 RUNDC3AQ59EK9 446 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 DCST1Q5T197 706 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 RAET1LQ5VY80 246 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ARSKQ6UWY0 536 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 C3P1Q6ZMU1 363 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 EIF3MQ7L2H7 374 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 MRGPRGQ86SM5 289 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 GTPBP8Q8N3Z3 284 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 MARVELD2Q8N4S9 558 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 FAM71CQ8NEG0 241 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ITLN2Q8WWU7 325 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 RND1Q92730 232 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ARSGQ96EG1 525 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 SH3YL1Q96HL8 342 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 TTYH2Q9BSA4 534 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 MED17Q9NVC6 651 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 CAMK2AQ9UQM7 478 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 RPH3AQ9Y2J0 694 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 L3MBTL1Q9Y468 752 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 AP4B1Q9Y6B7 739 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 LRRK2Q5S007 2527 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 DSPPQ9NZW4 1301 aa13.61□□□□□ -0.23
CSNK1E-210ENST00000442216 SPTBN1Q01082 2364 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 A0A0G2JPF8 293 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 OR2M5A3KFT3 312 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 GMNCA6NCL1 334 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 HNRNPCL2B2RXH8 293 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 HNRNPCL3B7ZW38 293 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CSTAP01040 98 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 HNRNPCL4P0DMR1 293 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 PGM1P36871 562 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 SEC24CP53992 1094 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CLDN18P56856 261 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 EEFSECP57772 596 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 KCNJ10P78508 379 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CBFBQ13951 182 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 MAPK11Q15759 364 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 MAPK14Q16539 360 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 ZSWIM7Q19AV6 140 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 PLPPR5Q32ZL2 321 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 ACSF3Q4G176 576 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CBLN3Q6UW01 205 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 OLIG3Q7RTU3 272 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 SPATA21Q7Z572 469 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 DHDDSQ86SQ9 333 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 RETREG3Q86VR2 466 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 LACC1Q8IV20 430 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 PEX5LQ8IYB4 626 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 OR5W2Q8NH69 310 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 GPR119Q8TDV5 335 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 ASB5Q8WWX0 329 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 ZG16BQ96DA0 208 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 ANKRD27Q96NW4 1050 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 UCN2Q96RP3 112 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CGREF1Q99674 301 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 RUBCNLQ9H714 662 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CALHM2Q9HA72 323 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 EXOSC3Q9NQT5 275 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 COQ3Q9NZJ6 369 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 PRDM4Q9UKN5 801 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 VDAC3Q9Y277 283 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CARD8Q9Y2G2 431 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 GPC6Q9Y625 555 aaPredicted RBP13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CAPN7Q9Y6W3 813 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CACNA1CQ13936 2221 aa13.6□□□□□ -0.23
CSNK1E-210ENST00000442216 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms