RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TIPRLO75663 272 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 MT-ND1P03886 318 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 UQCRBP14927 111 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 PTGDSP41222 190 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 GAS1P54826 345 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 PLAURQ03405 335 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 SKP2Q13309 424 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 OR1C1Q15619 314 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 PRAMEF20Q5VT98 475 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 LACC1Q8IV20 430 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 PSD4Q8NDX1 1056 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 TOR1AIP2Q8NFQ8 470 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 OR4D11Q8NGI4 311 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 TM9SF4Q92544 642 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 NR4A3Q92570 626 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 ZNF300Q96RE9 604 aaPredicted RBP18.93■□□□□ 0.62
CHD3-204ENST00000439235 AMBRA1Q9C0C7 1298 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 POLR2J2Q9GZM3 115 aaKnown RBP18.93■□□□□ 0.62
CHD3-204ENST00000439235 POLR2J3Q9H1A7 115 aaKnown RBP18.93■□□□□ 0.62
CHD3-204ENST00000439235 GALNT9Q9HCQ5 603 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 PPP4R1LQ9P1A2 415 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 CARD8Q9Y2G2 431 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 PCDHGA9Q9Y5G4 932 aaKnown RBP18.93■□□□□ 0.62
CHD3-204ENST00000439235 EXPH5Q8NEV8 1989 aa18.93■□□□□ 0.62
CHD3-204ENST00000439235 TAF4O00268 1085 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 HCRTR2O43614 444 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 FMO6PO60774 539 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 BCAS1O75363 584 aaPredicted RBP18.92■□□□□ 0.62
CHD3-204ENST00000439235 DEAF1O75398 565 aaPredicted RBP18.92■□□□□ 0.62
CHD3-204ENST00000439235 SNX4O95219 450 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 RHCEP18577 417 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 FASP25445 335 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 IFNA8P32881 189 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 SLC6A8P48029 635 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 ZNF136P52737 540 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 SUMO3P55854 103 aaPredicted RBP18.92■□□□□ 0.62
CHD3-204ENST00000439235 ARG2P78540 354 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 ZNF117Q03924 483 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 NDUFAF6Q330K2 333 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 BICRALQ6AI39 1079 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 IGFL2Q6UWQ7 119 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 B4GALNT2Q8NHY0 566 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 SNRNP27Q8WVK2 155 aaKnown RBP18.92■□□□□ 0.62
CHD3-204ENST00000439235 HAS2Q92819 552 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 MCHR1Q99705 422 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 SMAD5Q99717 465 aaKnown RBP18.92■□□□□ 0.62
CHD3-204ENST00000439235 RTN4RQ9BZR6 473 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 PLA2G3Q9NZ20 509 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 NDUFAF4Q9P032 175 aa18.92■□□□□ 0.62
CHD3-204ENST00000439235 CPAMD8Q8IZJ3 1885 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 AKAP13Q12802 2813 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 ADAM10O14672 748 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 SLC25A12O75746 678 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 NEURL1O76050 574 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 F10P00742 488 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 CST1P01037 141 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 GKN3PP0CG01 181 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 MSX1P28360 303 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 P2RX1P51575 399 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 CCR4P51679 360 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 CXADRP78310 365 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 NPTX1Q15818 432 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 ATP6AP1Q15904 470 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 MDGA2Q7Z553 956 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 RBM45Q8IUH3 476 aaKnown RBP18.91■□□□□ 0.62
CHD3-204ENST00000439235 SH3YL1Q96HL8 342 aaPredicted RBP18.91■□□□□ 0.62
CHD3-204ENST00000439235 PRRC1Q96M27 445 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 ZNF559Q9BR84 538 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 RNPEPL1Q9HAU8 725 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 PRDM4Q9UKN5 801 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 CHD8Q9HCK8 2581 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 CHD6Q8TD26 2715 aa18.91■□□□□ 0.62
CHD3-204ENST00000439235 IGLV3-32A0A0A0MS00 114 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 MKRN2OSH3BPM6 223 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 OIP5O43482 229 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 ATP6V1G2O95670 118 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 BAG2O95816 211 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 LDLRP01130 860 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 CD46P15529 392 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 EPS8Q12929 822 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 CBFBQ13951 182 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 IQCCQ4KMZ1 466 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 SPINK14Q6IE38 97 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 PLEKHM3Q6ZWE6 761 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 TSEN54Q7Z6J9 526 aaKnown RBP18.9■□□□□ 0.62
CHD3-204ENST00000439235 PACS2Q86VP3 889 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 ZNF227Q86WZ6 799 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 PQLC1Q8N2U9 271 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 MDS2Q8NDY4 140 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 OR5W2Q8NH69 310 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 DUSP19Q8WTR2 217 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 PHF10Q8WUB8 498 aaKnown RBP18.9■□□□□ 0.62
CHD3-204ENST00000439235 LRTOMTQ8WZ04 291 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 TMEM41AQ96HV5 264 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 C5orf34Q96MH7 638 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 FRMD6Q96NE9 622 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 SIGLEC12Q96PQ1 595 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 PIP5K1AQ99755 562 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 WFDC6Q9BQY6 131 aa18.9■□□□□ 0.62
CHD3-204ENST00000439235 TRIM2Q9C040 744 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms