RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GTF2IRD2Q86UP8 949 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 STK32CQ86UX6 486 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 DUSP26Q9BV47 211 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 UBTD1Q9HAC8 227 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 TIGARQ9NQ88 270 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 GLRX2Q9NS18 164 aa16.54■□□□□ 0.24
AC004540.1-201ENST00000439120 MAP1AP78559 2803 aaPredicted RBP16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 GJE1A6NN92 205 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 DEFB108AA8MXU0 73 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 ADAMDEC1O15204 470 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 SS18L1O75177 396 aaPredicted RBP16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 PABPC4LP0CB38 370 aaKnown RBP16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 FOSL1P15407 271 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 CREB1P16220 341 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 ARRB2P32121 409 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 SFTPDP35247 375 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 RNF144AP50876 292 aaPredicted RBP16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 ZNF117Q03924 483 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 CTU2Q2VPK5 515 aaKnown RBP16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 KRT71Q3SY84 523 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 ANKRD34AQ69YU3 496 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 LILRA2Q8N149 483 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 TMCO5AQ8N6Q1 288 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 WFDC11Q8NEX6 87 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 OR5AK3PQ8NH89 298 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 PSMA8Q8TAA3 256 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 CAVIN3Q969G5 261 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 COQ8BQ96D53 544 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 ADGRG7Q96K78 797 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 KLHL15Q96M94 604 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 NPAS1Q99742 590 aa16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 NOP53Q9NZM5 478 aaKnown RBP16.53■□□□□ 0.24
AC004540.1-201ENST00000439120 NPIPA5A0A0B4J1W7 369 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 A0A0J9YW62 118 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 WDR91A4D1P6 747 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 NPIPA7E9PJI5 369 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 RGS16O15492 202 aaPredicted RBP16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 ARHGEF9O43307 516 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 TYROBPO43914 113 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 LINGO3P0C6S8 592 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 NPIPA8P0DM63 369 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 G6PDP11413 515 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PPP3CBP16298 524 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 FPR1P21462 350 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PSMA4P25789 261 aaKnown RBP16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 ELK4P28324 431 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 P2RX1P51575 399 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 SUMO3P55854 103 aaPredicted RBP16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 CARD18P57730 90 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 NKX6-1P78426 367 aaPredicted RBP16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 EMX2Q04743 252 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 FOXF1Q12946 379 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 WDR93Q6P2C0 686 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 P3H2Q8IVL5 708 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 POC1BQ8TC44 478 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 OSTF1Q92882 214 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PIGTQ969N2 578 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PPP1R36Q96LQ0 422 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 PLSCR4Q9NRQ2 329 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 GPATCH2Q9NW75 528 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 CARD8Q9Y2G2 431 aa16.52■□□□□ 0.24
AC004540.1-201ENST00000439120 SETD2Q9BYW2 2564 aaPredicted RBP16.52■□□□□ 0.23
AC004540.1-201ENST00000439120 SIAH2O43255 324 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 SMPD2O60906 423 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 TUBBP07437 444 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 ATP12AP54707 1039 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 HBA1P69905 142 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 KLHL26Q53HC5 615 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 SHEQ5VZ18 495 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 BEND4Q6ZU67 534 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 RIMKLAQ8IXN7 391 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 OR5D16Q8NGK9 328 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 RFWD2Q8NHY2 731 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 NUDT8Q8WV74 236 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 CPNE4Q96A23 557 aaPredicted RBP16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 OR7D2Q96RA2 312 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 CCL19Q99731 98 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 TMEM109Q9BVC6 243 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 C12orf49Q9H741 205 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 PCDHGB4Q9UN71 923 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 DTNAQ9Y4J8 743 aa16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 GPC6Q9Y625 555 aaPredicted RBP16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 V9GYY5 206 aaPredicted RBP16.51■□□□□ 0.23
AC004540.1-201ENST00000439120 DUXAA6NLW8 204 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 SERPINE1P05121 402 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 IL11P20809 199 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 ADH6P28332 368 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 HOXC12P31275 282 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 ETV4P43268 484 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 CCR4P51679 360 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 CLDN8P56748 225 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 CHI3L2Q15782 390 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 ACKR1Q16570 336 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 TMEM201Q5SNT2 666 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 CBLN3Q6UW01 205 aa16.5■□□□□ 0.23
AC004540.1-201ENST00000439120 ATP6V1C2Q8NEY4 427 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms