RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ATP5J2P56134 94 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 CLDN17P56750 224 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 UBASH3AP57075 661 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 TWF1Q12792 350 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 BECN1Q14457 450 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 HEPACAMQ14CZ8 416 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 PSMD6Q15008 389 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 RBBP7Q16576 425 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 SLC22A6Q4U2R8 563 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 MUC21Q5SSG8 566 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 CYB5R2Q6BCY4 276 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 Q6ZS92 163 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 EFCAB13Q8IY85 973 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCDC63Q8NA47 563 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 OR1B1Q8NGR6 318 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 PYCR2Q96C36 320 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 SIPA1Q96FS4 1042 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 RBM41Q96IZ5 413 aaKnown RBP1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 CDHR1Q96JP9 859 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 PKNOX2Q96KN3 472 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 TESK2Q96S53 571 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 TSPAN18Q96SJ8 248 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 BAG1Q99933 345 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 AP1M1Q9BXS5 423 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 RSPO3Q9BXY4 272 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 SP140LQ9H930 580 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 C3orf14Q9HBI5 128 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 VAT1LQ9HCJ6 419 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 EXOC1Q9NV70 894 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 PKD2L2Q9NZM6 624 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 SLC12A6Q9UHW9 1150 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 ADAM28Q9UKQ2 775 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 PCDHGB4Q9UN71 923 aa1.92□□□□□ -2.1
HMGB1P18-201ENST00000438801 SF3B1O75533 1304 aaKnown RBP eCLIP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 VPS13DQ5THJ4 4388 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HEATR5AQ86XA9 2040 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 MYOFQ9NZM1 2061 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 DOCK5Q9H7D0 1870 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 KLF18A0A0U1RQI7 1052 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 WI2-2373I1.2A0A1W2PRP0 233 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 TRBC2A0A5B9 178 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 FAM47DPA6NHR8 397 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 A8MU76 341 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CDC7O00311 574 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 DKC1O60832 514 aaKnown RBP eCLIP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 TADA2AO75478 443 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 OR6B1O95007 311 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 FYNP06241 537 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HCKP08631 526 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HOXC4P09017 264 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 MYBL1P10243 752 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 ELK1P19419 428 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CTNNA1P35221 906 aaKnown RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 SPRP35270 261 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HSD17B3P37058 310 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HNRNPA3P51991 378 aaKnown RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 SLC12A3P55017 1021 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CSE1LP55060 971 aaKnown RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 ARPP19P56211 112 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 SNAP25P60880 206 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCL7P80098 99 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 ALCAMQ13740 583 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 C16orf72Q14CZ0 275 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 RASA2Q15283 850 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 FUT11Q495W5 492 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 ARMC4Q5T2S8 1044 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HECTD3Q5T447 861 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 DCAF12Q5T6F0 453 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CST9LP1Q5W188 147 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 TTC27Q6P3X3 843 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 DHRS11Q6UWP2 260 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 MACC1Q6ZN28 852 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 C17orf107Q6ZR85 190 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 Q6ZVQ6 151 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCDC186Q7Z3E2 898 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 CENPVQ7Z7K6 275 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 IQCHQ86VS3 1027 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 PPP1R16AQ96I34 528 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 GPR137Q96N19 417 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 DDA1Q9BW61 102 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 BBS2Q9BXC9 721 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 KLHL4Q9C0H6 718 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 PFDN4Q9NQP4 134 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 ANKEF1Q9NU02 776 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 SLC39A1Q9NY26 324 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 THYN1Q9P016 225 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 HS3ST2Q9Y278 367 aa1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 MAGED1Q9Y5V3 778 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P18-201ENST00000438801 MYH4Q9Y623 1939 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 TRBV5-4A0A0C4DH59 114 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 IGLON5A6NGN9 336 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 P4HA2O15460 535 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 KIF5CO60282 957 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 NDUFB10O96000 172 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 IGLV3-19P01714 112 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 IGKV3-11P04433 115 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 IGHV4-34P06331 123 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 NUDT17P0C025 328 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 CCDC175P0C221 793 aa1.9□□□□□ -2.11
HMGB1P18-201ENST00000438801 PVRP15151 417 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms