RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MSANTD1Q6ZTZ1 278 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 P4HA3Q7Z4N8 544 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 DMRTC2Q8IXT2 367 aaPredicted RBP22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 RELL2Q8NC24 303 aaPredicted RBP22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 OIT3Q8WWZ8 545 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 MAGEB18Q96M61 343 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 SFXN3Q9BWM7 321 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 RMND5AQ9H871 391 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 POLE3Q9NRF9 147 aa22.32■■□□□ 1.16
RAPGEF1-206ENST00000438647 PCNX3Q9H6A9 2034 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 SASH3O75995 380 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 NUDT14O95848 222 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 PEX19P40855 299 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 EIF1P41567 113 aaKnown RBP22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 P2RX1P51575 399 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 HPCAP84074 193 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 OR2A2Q6IF42 318 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 CKAP2Q8WWK9 683 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 SMPDL3BQ92485 455 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 C14orf79Q96F83 325 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 INPP5KQ9BT40 448 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 FOXD3Q9UJU5 478 aaPredicted RBP22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 CARD8Q9Y2G2 431 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 DOCK7Q96N67 2140 aa22.31■■□□□ 1.16
RAPGEF1-206ENST00000438647 SLC22A20A6NK97 555 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 FCMRO60667 390 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 TNFRSF21O75509 655 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 KRT75O95678 551 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 ME2P23368 584 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 POLR2JP52435 117 aaKnown RBP22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF141Q15928 474 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 PDZK1Q5T2W1 519 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 POMZP3Q6PJE2 187 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 RNF130Q86XS8 419 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 RAB8BQ92930 207 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 ROPN1LQ96C74 230 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 CCDC28BQ9BUN5 200 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 MKLN1Q9UL63 735 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 WDR45Q9Y484 360 aa22.3■■□□□ 1.16
RAPGEF1-206ENST00000438647 TEX15Q9BXT5 2789 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 KIAA1549Q9HCM3 1950 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 SERINC4A6NH21 518 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 SHISA8B8ZZ34 492 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 SYT5O00445 386 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF264O43296 627 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 KIAA0513O60268 411 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 EIF4E2O60573 245 aaKnown RBP22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 ANP32DO95626 131 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 UBL4AP11441 157 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 CDKN2CP42773 168 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 MAGEA8P43361 318 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 MRPL19P49406 292 aaKnown RBP22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 IDH3AP50213 366 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 SUCLG1P53597 346 aaKnown RBP22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 CLDN15P56746 228 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 CLDN20P56880 219 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 FBXL19-AS1Q494R0 122 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 CBLN3Q6UW01 205 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF295-AS1Q8N0V1 137 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 METTL25Q8N6Q8 603 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 RNASE6Q93091 150 aaKnown RBP22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 INTS12Q96CB8 462 aaKnown RBP22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 ITCHQ96J02 903 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 RNF145Q96MT1 663 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 PAQR5Q9NXK6 330 aaPredicted RBP22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 ICAM5Q9UMF0 924 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 LIPT1Q9Y234 373 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZNF175Q9Y473 711 aa22.29■■□□□ 1.16
RAPGEF1-206ENST00000438647 FAM234BA2RU67 622 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 EEF1E1-BLOC1S5C9J1V9 151 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 EEF1E1O43324 174 aaKnown RBP22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 UGT2B17O75795 530 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 GSNP06396 782 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 CRHP06850 196 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 LINGO3P0C6S8 592 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 ADH6P28332 368 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 UQCRC1P31930 480 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 AQP5P55064 265 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 RAC1P63000 192 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 IRX1P78414 480 aaPredicted RBP22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 SGCBQ16585 318 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 TIGD2Q4W5G0 525 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 GPAT3Q53EU6 434 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 TMCO5AQ8N6Q1 288 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 TOR1AIP2Q8NFQ8 470 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 OR9I1Q8NGQ6 314 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 PINK1Q9BXM7 581 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 KCNN3Q9UGI6 736 aa22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 GPC6Q9Y625 555 aaPredicted RBP22.28■■□□□ 1.16
RAPGEF1-206ENST00000438647 H0YC42 278 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 HMGN4O00479 90 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 TGM6O95932 706 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 ZCCHC18P0CG32 403 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 PSMA4P25789 261 aaKnown RBP22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 ELK4P28324 431 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 RNF144AP50876 292 aaPredicted RBP22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 TPD52P55327 224 aaPredicted RBP22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 CBFBQ13951 182 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 AP1ARQ63HQ0 302 aa22.27■■□□□ 1.16
RAPGEF1-206ENST00000438647 TYW3Q6IPR3 259 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms