RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 INTS14Q96SY0 518 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 TESQ9UGI8 421 aaKnown RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 MYOM1P52179 1685 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 PIGBOS1A0A0B4J2F0 54 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 ANKRD33BA6NCL7 494 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 NME4O00746 187 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 AGPAT2O15120 278 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 DLSTP36957 453 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 RRAS2P62070 204 aaPredicted RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 HNRNPA1L2Q32P51 320 aaKnown RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 GDE1Q9NZC3 331 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 ZNF225Q9UK10 706 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 CBLCQ9ULV8 474 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 SRPK3Q9UPE1 567 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 E7ESA3 106 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 ENSAO43768 121 aaKnown RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 RAB3DO95716 219 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 HMGN2P05204 90 aaKnown RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 ARSBP15848 533 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 NKX2-5P52952 324 aaPredicted RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 PPP5CP53041 499 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 KDELC1Q6UW63 502 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 LMNTD1Q8N9Z9 388 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 RDH14Q9HBH5 336 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 CUTCQ9NTM9 273 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 LOC102725191A0A1B0GVB3 256 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 SLC16A7O60669 478 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 LILRB3O75022 631 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 CD38P28907 300 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 CTBSQ01459 385 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 TGFBR3Q03167 851 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 VRK2Q86Y07 508 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 NDNFQ8TB73 568 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 GPR148Q8TDV2 347 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 SMIM3Q9BZL3 60 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 EMC3Q9P0I2 261 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 COL14A1Q05707 1796 aaKnown RBP14.46□□□□□ -0.09
PTPRF-206ENST00000429895 SSX2Q16385 188 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 OR52W1Q6IF63 320 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 FBXW12Q6X9E4 464 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 MRPL10Q7Z7H8 261 aaKnown RBP14.46□□□□□ -0.09
PTPRF-206ENST00000429895 RNF175Q8N4F7 328 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 ARRDC3Q96B67 414 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 SNX18Q96RF0 628 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 GMLQ99445 158 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 KLF16Q9BXK1 252 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-206ENST00000429895 ZNF355PQ9NSJ1 428 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 SLC6A14Q9UN76 642 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 SLC22A5O76082 557 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 CD46P15529 392 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 CPOXP36551 454 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 CTSCP53634 463 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 GABARAPL2P60520 117 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 VASNQ6EMK4 673 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 GRAMD2AQ8IUY3 354 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 CCDC28AQ8IWP9 274 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 PDZD9Q8IXQ8 264 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 GIMAP5Q96F15 307 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 DTD2Q96FN9 168 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 THSD1Q9NS62 852 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 SACM1LQ9NTJ5 587 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 PRELID1Q9Y255 219 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 HSPB6O14558 160 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 TMEM11P17152 192 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 TAS2R20P59543 309 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 ZC3H3Q8IXZ2 948 aaKnown RBP14.46□□□□□ -0.09
PTPRF-206ENST00000429895 LHPPQ9H008 270 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 TAAR2Q9P1P5 351 aa14.46□□□□□ -0.09
PTPRF-206ENST00000429895 KIR2DS5A0A0G2JLQ3 304 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 A0A0G2JNG1 304 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 MROH6A6NGR9 719 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 CEBPZOSA8MTT3 80 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 KIR2DS3K7RE56 304 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 GJB3O75712 270 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 CXCR4P61073 352 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 HTD2P86397 168 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 KIR2DS5Q14953 304 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 ESCO2Q56NI9 601 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 EXOSC6Q5RKV6 272 aaKnown RBP14.46□□□□□ -0.1
PTPRF-206ENST00000429895 C1orf220Q5T0J3 134 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 PM20D1Q6GTS8 502 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 C17orf99Q6UX52 265 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 ENDOVQ8N8Q3 282 aaKnown RBP14.46□□□□□ -0.1
PTPRF-206ENST00000429895 WDSUB1Q8N9V3 476 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 BBS1Q8NFJ9 593 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 CNOT9Q92600 299 aaKnown RBP14.46□□□□□ -0.1
PTPRF-206ENST00000429895 UBXN10Q96LJ8 280 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 MYADMQ96S97 322 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 SORBS2O94875 1100 aaKnown RBP14.46□□□□□ -0.1
PTPRF-206ENST00000429895 SSTR4P31391 388 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 SPOCK1Q08629 439 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 MORN1Q5T089 497 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 OR5L1Q8NGL2 311 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 SLC46A2Q9BY10 475 aa14.46□□□□□ -0.1
PTPRF-206ENST00000429895 KCPQ6ZWJ8 1503 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 G3V3Y1 287 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SC5DO75845 299 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 RAB5BP61020 215 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 MZT1Q08AG7 82 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF674Q2M3X9 581 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms