RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 NKX2-6A6NCS4 301 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 SERINC4A6NH21 518 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 HMGN4O00479 90 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 ZNF264O43296 627 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 EIF4E2O60573 245 aaKnown RBP16.88■□□□□ 0.29
PRNP-202ENST00000424424 UGT2B17O75795 530 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 TOXO94900 526 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 UBL4AP11441 157 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 RPS3AP61247 264 aaKnown RBP16.88■□□□□ 0.29
PRNP-202ENST00000424424 ZNF117Q03924 483 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 SQLEQ14534 574 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 PLPPR5Q32ZL2 321 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.88■□□□□ 0.29
PRNP-202ENST00000424424 GRAMD2AQ8IUY3 354 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 ZNF619Q8N2I2 560 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 TMCO5AQ8N6Q1 288 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 PNPT1Q8TCS8 783 aaKnown RBP16.88■□□□□ 0.29
PRNP-202ENST00000424424 ZFP90Q8TF47 636 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 SMPDL3BQ92485 455 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 WNT2BQ93097 391 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 MARVELD3Q96A59 401 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 LRRC46Q96FV0 321 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 ZFP3Q96NJ6 502 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 UCN2Q96RP3 112 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 MED17Q9NVC6 651 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 ZNF629Q9UEG4 869 aaPredicted RBP16.88■□□□□ 0.29
PRNP-202ENST00000424424 DCTN4Q9UJW0 460 aa16.88■□□□□ 0.29
PRNP-202ENST00000424424 C7orf72A4D263 438 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 KDM4EB2RXH2 506 aaPredicted RBP16.87■□□□□ 0.29
PRNP-202ENST00000424424 SEC14L5O43304 696 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 KIAA0513O60268 411 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 TNFRSF21O75509 655 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
PRNP-202ENST00000424424 EIF1P41567 113 aaKnown RBP16.87■□□□□ 0.29
PRNP-202ENST00000424424 TMEM44Q2T9K0 475 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 TYW3Q6IPR3 259 aaKnown RBP16.87■□□□□ 0.29
PRNP-202ENST00000424424 BLOC1S3Q6QNY0 202 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 CBLN3Q6UW01 205 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 P4HA3Q7Z4N8 544 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 ADGRE4PQ86SQ3 457 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 GTPBP8Q8N3Z3 284 aaPredicted RBP16.87■□□□□ 0.29
PRNP-202ENST00000424424 TOR1AIP2Q8NFQ8 470 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 RFWD2Q8NHY2 731 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 SPDL1Q96EA4 605 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 TRNT1Q96Q11 434 aaKnown RBP16.87■□□□□ 0.29
PRNP-202ENST00000424424 SAP130Q9H0E3 1048 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 TPT1P8Q9HAU6 139 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 ICAM5Q9UMF0 924 aa16.87■□□□□ 0.29
PRNP-202ENST00000424424 A0A0G2JND7 137 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 SHISA8B8ZZ34 492 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 C19orf84I3L1E1 186 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 NR5A2O00482 541 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 H6PDO95479 791 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 CSTAP01040 98 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 TMIGD3P0DMS9 266 aaPredicted RBP16.86■□□□□ 0.29
PRNP-202ENST00000424424 TROVE2P10155 538 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRNP-202ENST00000424424 NR2F1P10589 423 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 BMP5P22003 454 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 ME2P23368 584 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 CTSSP25774 331 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 OPRM1P35372 400 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 CRATP43155 626 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 RNF144AP50876 292 aaPredicted RBP16.86■□□□□ 0.29
PRNP-202ENST00000424424 CBFBQ13951 182 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 SGCBQ16585 318 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 AGKQ53H12 422 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 AP1ARQ63HQ0 302 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 SLC2A7Q6PXP3 512 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 FRRS1Q6ZNA5 592 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 EIF3MQ7L2H7 374 aaKnown RBP16.86■□□□□ 0.29
PRNP-202ENST00000424424 OLIG3Q7RTU3 272 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 LIX1LQ8IVB5 337 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 C9orf106Q8NAJ2 232 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 NAXEQ8NCW5 288 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 GTF2H4Q92759 462 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 RNF145Q96MT1 663 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 RAD21L1Q9H4I0 556 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.86■□□□□ 0.29
PRNP-202ENST00000424424 THUMPD1Q9NXG2 353 aaKnown RBP16.86■□□□□ 0.29
PRNP-202ENST00000424424 CLCF1Q9UBD9 225 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 SLC35A3Q9Y2D2 325 aa16.86■□□□□ 0.29
PRNP-202ENST00000424424 GPC6Q9Y625 555 aaPredicted RBP16.86■□□□□ 0.29
PRNP-202ENST00000424424 TMEM247A6NEH6 219 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 CYP7B1O75881 506 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 RCBTB2O95199 551 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 C1QCP02747 245 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 SNRPB2P08579 225 aaKnown RBP16.85■□□□□ 0.29
PRNP-202ENST00000424424 LINGO3P0C6S8 592 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 ADH6P28332 368 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 CCR4P51679 360 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 ZNF136P52737 540 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 SUCLG1P53597 346 aaKnown RBP16.85■□□□□ 0.29
PRNP-202ENST00000424424 RAC1P63000 192 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 EEF1A1P68104 462 aaKnown RBP16.85■□□□□ 0.29
PRNP-202ENST00000424424 FUT5Q11128 374 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 FGFBP1Q14512 234 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 SYPL1Q16563 259 aa16.85■□□□□ 0.29
PRNP-202ENST00000424424 COX20Q5RI15 118 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms