RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CTNNAL1Q9UBT7 734 aa5.48□□□□□ -1.53
SDCBP-203ENST00000424270 MRTO4Q9UKD2 239 aaKnown RBP5.48□□□□□ -1.53
SDCBP-203ENST00000424270 NUP50Q9UKX7 468 aa5.48□□□□□ -1.53
SDCBP-203ENST00000424270 ABCG2Q9UNQ0 655 aa5.48□□□□□ -1.53
SDCBP-203ENST00000424270 GPR55Q9Y2T6 319 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-203ENST00000424270 AMDHD2Q9Y303 409 aa5.48□□□□□ -1.53
SDCBP-203ENST00000424270 RNF114Q9Y508 228 aa5.48□□□□□ -1.53
SDCBP-203ENST00000424270 PRR14LQ5THK1 2151 aa5.48□□□□□ -1.53
SDCBP-203ENST00000424270 A0A087WZY1 265 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CLPSL1A2RUU4 121 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 FAM181BA6NEQ2 426 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 FOXE1O00358 373 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 KLF11O14901 512 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 WNT9BO14905 357 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 TMPRSS11DO60235 418 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 NME6O75414 186 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ANGPTL1O95841 491 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 NUDT14O95848 222 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CBX7O95931 251 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 PCSK2P16519 638 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CSNK2A2P19784 350 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 TCN1P20061 433 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 NPR2P20594 1047 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ENPP1P22413 925 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 GATA3P23771 443 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 RAD52P43351 418 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 MAGEA1P43355 309 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 HSPA7P48741 367 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ALDH9A1P49189 494 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 PGGT1BP53609 377 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 UBASH3AP57075 661 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 PRPS1P60891 318 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 MRPS35P82673 323 aaKnown RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 TGFBR3Q03167 851 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 MVKQ03426 396 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CSTF3Q12996 717 aaKnown RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 PDCD1Q15116 288 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 EFNB3Q15768 340 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 DECR1Q16698 335 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 PRICKLE4Q2TBC4 344 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 TRMT12Q53H54 448 aaKnown RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 OTUD3Q5T2D3 398 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 AVPI1Q5T686 147 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CPTPQ5TA50 214 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 MEPCEQ7L2J0 689 aaKnown RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 LRRC70Q7Z2Q7 622 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CARM1Q86X55 608 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 BCL6BQ8N143 479 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 TXLNBQ8N3L3 684 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 TCAIMQ8N3R3 496 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 GTPBP8Q8N3Z3 284 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 RNF175Q8N4F7 328 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CKAP2Q8WWK9 683 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 RAB8BQ92930 207 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 EXT2Q93063 718 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 KLHL29Q96CT2 875 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 SH3YL1Q96HL8 342 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CDK15Q96Q40 435 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 RSPO3Q9BXY4 272 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF717Q9BY31 904 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 SRXN1Q9BYN0 137 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 CXorf36Q9H7Y0 433 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 AURKAIP1Q9NWT8 199 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 MAT2BQ9NZL9 334 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 EMC3Q9P0I2 261 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ASH2LQ9UBL3 628 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 UPB1Q9UBR1 384 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF69Q9UC07 566 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ICAM5Q9UMF0 924 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 NOSIPQ9Y314 301 aaKnown RBP5.47□□□□□ -1.53
SDCBP-203ENST00000424270 OARD1Q9Y530 152 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ASB4Q9Y574 426 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF780BQ9Y6R6 833 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 EXPH5Q8NEV8 1989 aa5.47□□□□□ -1.53
SDCBP-203ENST00000424270 MAGEB16A2A368 324 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 AKR1B15C9JRZ8 316 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 CLDN34H7C241 214 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 LIASO43766 372 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ERLIN1O75477 346 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 SKAP2O75563 359 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 STK16O75716 305 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 BCAS2O75934 225 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ESRRBO95718 433 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 NGFP01138 241 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 HPGDP15428 266 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 SELEP16581 610 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 S1PR1P21453 382 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ACHEP22303 614 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 PTX3P26022 381 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ARL1P40616 181 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 EMDP50402 254 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ATP4BP51164 291 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 PSMD4P55036 377 aaKnown RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 LCN2P80188 198 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 CDKL1Q00532 357 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 TCEAL1Q15170 157 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 TSNQ15631 228 aaKnown RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 LTB4RQ15722 352 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 GABRA6Q16445 453 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms