RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ACAD8Q9UKU7 415 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 THADAQ6YHU6 1953 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 SPTBN2O15020 2390 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 A0A1W2PQL4 384 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 A6NL46 340 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 CASKO14936 926 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 GPR75O95800 540 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 LIMS3P0CW19 117 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 LIMS4P0CW20 117 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF12P17014 697 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 SLC15A1P46059 708 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 CDK5Q00535 292 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 C1DQ13901 141 aaKnown RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 SMAD2Q15796 467 aaKnown RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF628Q5EBL2 1059 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 NXNL2Q5VZ03 156 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF367Q7RTV3 350 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 LAPTM4BQ86VI4 370 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 VWA5B2Q8N398 1253 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 RIT1Q92963 219 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 MSLNLQ96KJ4 702 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 NECTIN4Q96NY8 510 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ELF4Q99607 663 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 TAPBPLQ9BX59 468 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 MEPEQ9NQ76 525 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 SSR3Q9UNL2 185 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 PCDHGB6Q9Y5F9 930 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 DOK2O60496 412 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 GALR3O60755 368 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 STX11O75558 287 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 APBB3O95704 486 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 RAB36O95755 333 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 CBX7O95931 251 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SOX6P35712 828 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PPP5CP53041 499 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 TRA2BP62995 288 aaKnown RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 VWA2Q5GFL6 755 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 EOGTQ5NDL2 527 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 FAM131AQ6UXB0 335 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 Q7L0L9 218 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 RCBTB1Q8NDN9 531 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 KBTBD8Q8NFY9 601 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 FANK1Q8TC84 345 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PIGKQ92643 395 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 TSLPQ969D9 159 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PMEPA1Q969W9 287 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF524Q96C55 264 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 HSPA12BQ96MM6 686 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 MND1Q9BWT6 205 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 CDCA4Q9BXL8 241 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 MTHFD2LQ9H903 347 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 LSM2Q9Y333 95 aaKnown RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 IDSB3KWA1 339 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 J3QLW9 94 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 ATP6V1G1O75348 118 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 UPK1BO75841 260 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 GPANK1O95872 356 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SCG5P05408 212 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF19P17023 458 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 TGM1P22735 817 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SERPINB1P30740 379 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 OR1D5P58170 312 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 KIAA1024LP59773 190 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PRICKLE4Q2TBC4 344 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 CCBE1Q6UXH8 406 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 NRARPQ7Z6K4 114 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 OR2L13Q8N349 312 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 TMEM163Q8TC26 289 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 TMEM239Q8WW34 195 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 FCGR1BQ92637 280 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 VMP1Q96GC9 406 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 DEPDC7Q96QD5 511 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SLC38A2Q96QD8 506 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PPIL3Q9H2H8 161 aaKnown RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 BCL2L10Q9HD36 194 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 LYARQ9NX58 379 aaKnown RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 GMEB1Q9Y692 573 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 A0A0J9YY10 115 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 OR5K3A6NET4 321 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PRAMEF26H0Y7S4 382 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 BLOC1S5-TXNDC5H3BN57 136 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 DPM1O60762 260 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 POU2F2P09086 479 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SMIM11AP58511 58 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PSG6Q00889 435 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 CRMP1Q14194 572 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 GDPD3Q7L5L3 318 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 ZPLD1Q8TCW7 415 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 GNPDA2Q8TDQ7 276 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 ZNRF4Q8WWF5 429 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 ACOT11Q8WXI4 607 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 TM4SF19Q96DZ7 209 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-204ENST00000423636 PRSS27Q9BQR3 290 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 GSDMCQ9BYG8 508 aa11.04□□□□□ -0.64
PTPRN-204ENST00000423636 SMURF1Q9HCE7 757 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms