RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SUMO3P55854 103 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 B3GALT5-AS1P59052 145 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ZNF117Q03924 483 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 CD226Q15762 336 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 GPAT3Q53EU6 434 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 KLHL26Q53HC5 615 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 PDZK1Q5T2W1 519 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 HEPHL1Q6MZM0 1159 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 DNAJC14Q6Y2X3 702 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 GRAMD2AQ8IUY3 354 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 TMCO5AQ8N6Q1 288 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 OR5M1Q8NGP8 315 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 OR9I1Q8NGQ6 314 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 MBD3L2Q8NHZ7 208 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 OIT3Q8WWZ8 545 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 SMPDL3BQ92485 455 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 RAB8BQ92930 207 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ROPN1LQ96C74 230 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ZFP3Q96NJ6 502 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 EBF4Q9BQW3 602 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 INPP5KQ9BT40 448 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ZNF350Q9GZX5 532 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 RABEP2Q9H5N1 569 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 MED17Q9NVC6 651 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ZNF629Q9UEG4 869 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 MKLN1Q9UL63 735 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 TRIM33Q9UPN9 1127 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 LIPT1Q9Y234 373 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 CARD8Q9Y2G2 431 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ZNF337Q9Y3M9 751 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 WDR45Q9Y484 360 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 NCOA6Q14686 2063 aaPredicted RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 UQCRHLA0A096LP55 91 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 TMEM247A6NEH6 219 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 SERINC4A6NH21 518 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 NPIPB9F8W1W9 429 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 C19orf84I3L1E1 186 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 HMGN4O00479 90 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 ZNF264O43296 627 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 EIF4E2O60573 245 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 TNFRSF21O75509 655 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 CYP7B1O75881 506 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 TOXO94900 526 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 GUSBP08236 651 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 TMIGD3P0DMS9 266 aaPredicted RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 CTSSP25774 331 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 CDKN2CP42773 168 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 MRPL19P49406 292 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 RNF144AP50876 292 aaPredicted RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 EEF1A1P68104 462 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 SQLEQ14534 574 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 ZNF141Q15928 474 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 SGCBQ16585 318 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 PDSS1Q5T2R2 415 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 EEF1A1P5Q5VTE0 462 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 MEX3BQ6ZN04 569 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 SEM1Q6ZVN7 128 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 EIF3MQ7L2H7 374 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 ZNF619Q8N2I2 560 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 GTPBP8Q8N3Z3 284 aaPredicted RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 TOR1AIP2Q8NFQ8 470 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 RFWD2Q8NHY2 731 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 PNPT1Q8TCS8 783 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 VPS33AQ96AX1 596 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 TRNT1Q96Q11 434 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 RAD21L1Q9H4I0 556 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 CACYBPQ9HB71 228 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 TMEM45AQ9NWC5 275 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 THUMPD1Q9NXG2 353 aaKnown RBP9.88□□□□□ -0.83
USP49-204ENST00000423567 NCKAP5O14513 1909 aa9.88□□□□□ -0.83
USP49-204ENST00000423567 A0A0G2JND7 137 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 C7orf72A4D263 438 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 SLC22A20A6NK97 555 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 GJE1A6NN92 205 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 KDM4EB2RXH2 506 aaPredicted RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 SHISA8B8ZZ34 492 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 NR5A2O00482 541 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 EIF1AYO14602 144 aaKnown RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 KIAA0513O60268 411 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 FCMRO60667 390 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 EDF1O60869 148 aaKnown RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 UGT2B17O75795 530 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 RCBTB2O95199 551 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 H6PDO95479 791 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 IL18BPO95998 194 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 CSTAP01040 98 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ZCCHC18P0CG32 403 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 NR2F1P10589 423 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 FCGR2AP12318 317 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 NCF2P19878 526 aaPredicted RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 ELK4P28324 431 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 PEX19P40855 299 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 CRATP43155 626 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ASCL1P50553 236 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ATP4BP51164 291 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 RAC1P63000 192 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 CBFBQ13951 182 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 GNA13Q14344 377 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms