RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 UGT2B28Q9BY64 529 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 TRIM8Q9BZR9 551 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 RUBCNLQ9H714 662 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 A4GALTQ9NPC4 353 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 FAM53CQ9NYF3 392 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 SLC35A3Q9Y2D2 325 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 ARL2BPQ9Y2Y0 163 aa14.29□□□□□ -0.12
BRAT1-202ENST00000421712 A0A087WZY1 265 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 A0A0G2JPF8 293 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 HNRNPCL2B2RXH8 293 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 HNRNPCL3B7ZW38 293 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 OIP5O43482 229 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 EIF4E2O60573 245 aaKnown RBP14.28□□□□□ -0.12
BRAT1-202ENST00000421712 HNRNPCL1O60812 293 aaKnown RBP14.28□□□□□ -0.12
BRAT1-202ENST00000421712 DBIP07108 87 aaKnown RBP14.28□□□□□ -0.12
BRAT1-202ENST00000421712 HNRNPCL4P0DMR1 293 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 COX4I1P13073 169 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 GABRA1P14867 456 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 GPX2P18283 190 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 SLC6A2P23975 617 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 CHMP24386 653 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 STARP49675 285 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 SRSF1Q07955 248 aaKnown RBP eCLIP14.28□□□□□ -0.12
BRAT1-202ENST00000421712 CBFBQ13951 182 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 CYP51A1Q16850 503 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 TRMT5Q32P41 509 aaKnown RBP14.28□□□□□ -0.12
BRAT1-202ENST00000421712 COQ5Q5HYK3 327 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 NHSL2Q5HYW2 709 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 VASNQ6EMK4 673 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 MTFR2Q6P444 385 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 CBLN3Q6UW01 205 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 OR52P1PQ8NH57 321 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 NFKBIDQ8NI38 313 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 SSC4DQ8WTU2 575 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 OIT3Q8WWZ8 545 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 SMPDL3BQ92485 455 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 PMM1Q92871 262 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 RCN3Q96D15 328 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 SH3GL1Q99961 368 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 TREX2Q9BQ50 279 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-202ENST00000421712 CCDC106Q9BWC9 280 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 LAT2Q9GZY6 243 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 IKZF5Q9H5V7 419 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 MED17Q9NVC6 651 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 ADAM21Q9UKJ8 722 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF232Q9UNY5 417 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 MEMO1Q9Y316 297 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 L3MBTL1Q9Y468 752 aa14.28□□□□□ -0.12
BRAT1-202ENST00000421712 DIDO1Q9BTC0 2240 aaKnown RBP14.27□□□□□ -0.12
BRAT1-202ENST00000421712 MED12Q93074 2177 aa14.27□□□□□ -0.12
BRAT1-202ENST00000421712 RELNP78509 3460 aa14.27□□□□□ -0.12
BRAT1-202ENST00000421712 AGAP5A6NIR3 686 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 AHRRA9YTQ3 701 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 SHISA8B8ZZ34 492 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 E9PLN8 166 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 H3BML4 177 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 AIM2O14862 343 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 WDR1O75083 606 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 NPPAP01160 153 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 BMP2P12643 396 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 POU3F2P20265 443 aaPredicted RBP14.27□□□□□ -0.13
BRAT1-202ENST00000421712 ACVR2AP27037 513 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 SUMO3P55854 103 aaPredicted RBP14.27□□□□□ -0.13
BRAT1-202ENST00000421712 GFRA1P56159 465 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 CDK6Q00534 326 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 ART3Q13508 389 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 SELPLGQ14242 412 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 FGFBP1Q14512 234 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 GLYR1Q49A26 553 aaPredicted RBP14.27□□□□□ -0.13
BRAT1-202ENST00000421712 EMC4Q5J8M3 183 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 DCST1Q5T197 706 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 TMEM211Q6ICI0 200 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 CHMP1BQ7LBR1 199 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 PIGWQ7Z7B1 504 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 OR5W2Q8NH69 310 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 WDYHV1Q96HA8 205 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 VKORC1Q9BQB6 163 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 SLC39A3Q9BRY0 314 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 PIF1Q9H611 641 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 STOML1Q9UBI4 398 aa14.27□□□□□ -0.13
BRAT1-202ENST00000421712 HIVEP3Q5T1R4 2406 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 OR2M5A3KFT3 312 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 CLDN24A6NM45 220 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 H0Y3Z8 333 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 LINC01387J3KSC0 135 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ZG16O60844 167 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 PGM3O95394 542 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ARAFP10398 606 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 RYKP34925 604 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 PGM1P36871 562 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 ADH7P40394 386 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 B3GALT5-AS1P59052 145 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 PMPCAQ10713 525 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 SCARB2Q14108 478 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 LARS2Q15031 903 aaKnown RBP14.26□□□□□ -0.13
BRAT1-202ENST00000421712 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.138e-13■■■■■ 34.5
BRAT1-202ENST00000421712 MAPK11Q15759 364 aa14.26□□□□□ -0.13
BRAT1-202ENST00000421712 PLPPR5Q32ZL2 321 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms