RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 PM20D1Q6GTS8 502 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 APCDD1Q8J025 514 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 OR9A2Q8NGT5 310 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 METTL2AQ96IZ6 378 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ARL5BQ96KC2 179 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 C11orf84Q9BUA3 381 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 CWH43Q9H720 699 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ACKR4Q9NPB9 350 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SLAMF7Q9NQ25 335 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ETV1P50549 477 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 TAS2R19P59542 299 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SHC2P98077 582 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 HOXC5Q00444 222 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF91Q05481 1191 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 MEPCEQ7L2J0 689 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 DPY19L4Q7Z388 723 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 GLB1L2Q8IW92 636 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ARFGAP1Q8N6T3 406 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 DUSP19Q8WTR2 217 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 FAM71F1Q96KD3 344 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SNX18Q96RF0 628 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ANKRD34BA5PLL1 514 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 STC2O76061 302 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 PTHP01270 115 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 RNH1P13489 461 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 RAB3AP20336 220 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 DDCP20711 480 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 CDK3Q00526 305 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 LTBQ06643 244 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ARL6IP1Q15041 203 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ACVR1CQ8NER5 493 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SMAP2Q8WU79 429 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 VSTM2BA6NLU5 285 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 A8MXE2 369 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 INHAP05111 366 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 RHOP08100 348 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF26P17031 533 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ETV5P41161 510 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 MAGEB1P43366 347 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 RPS25P62851 125 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 CLDN10P78369 228 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 PAPD4Q6PIY7 484 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SLAIN1Q8ND83 568 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SLC35B4Q969S0 331 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 MS4A4EQ96PG1 132 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SORBS1Q9BX66 1292 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 C1QTNF2Q9BXJ5 285 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 F2P00734 622 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 FUT1P19526 365 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 GRM7Q14831 915 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 LEXMQ3ZCV2 418 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 HIST2H3PS2Q5TEC6 136 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 TXNDC15Q96J42 360 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 GALNT9Q9HCQ5 603 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 TXNRD2Q9NNW7 524 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 DMRT3Q9NQL9 472 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 TAS2R16Q9NYV7 291 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 MRPS17Q9Y2R5 130 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 GPR32O75388 356 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 ATG12O94817 140 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 GABRA5P31644 462 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 MALLQ13021 153 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 RBM39Q14498 530 aaKnown RBP11.62□□□□□ -0.55
CLCN4-203ENST00000421085 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 C6orf132Q5T0Z8 1188 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 AVPI1Q5T686 147 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF704Q6ZNC4 412 aaPredicted RBP11.62□□□□□ -0.55
CLCN4-203ENST00000421085 CREB3L2Q70SY1 520 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 CADM3Q8N126 398 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 HOXB5P09067 269 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 ARSAP15289 507 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 PPT1P50897 306 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 MRPL49Q13405 166 aaKnown RBP11.62□□□□□ -0.55
CLCN4-203ENST00000421085 FCN2Q15485 313 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 TPRA1Q86W33 373 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 RCBTB1Q8NDN9 531 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 SLC2A12Q8TD20 617 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 SYT11Q9BT88 431 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 SPHK2Q9NRA0 654 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 A0A0B4J2A0 478 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 RAC2P15153 192 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 RPS21P63220 83 aaKnown RBP11.62□□□□□ -0.55
CLCN4-203ENST00000421085 GBX1Q14549 363 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 DEFB119Q8N690 84 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 DAZLQ92904 295 aaKnown RBP11.62□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF681Q96N22 645 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 PSORS1C1Q9UIG5 152 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms