RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PSMD4P55036 377 aaKnown RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 DCAF7P61962 342 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 TMEM236Q5W0B7 351 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 WDR88Q6ZMY6 472 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 TMEM255BQ8WV15 326 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 ACOT11Q8WXI4 607 aaPredicted RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 LRFN5Q96NI6 719 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 PAK1IP1Q9NWT1 392 aaPredicted RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 ENOPH1Q9UHY7 261 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 PPIEQ9UNP9 301 aaKnown RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 TPRKBQ9Y3C4 175 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 KIF26BQ2KJY2 2108 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 TRAPPC13A5PLN9 417 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 B4E171 279 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 SEC14L2O76054 403 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 HTR1AP08908 422 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 GABRB1P18505 474 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 IFNA8P32881 189 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 TSPAN7P41732 249 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 OMPP47874 163 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 EMP2P54851 167 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 E2F1Q01094 437 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 STPG1Q5TH74 334 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 FNDC7Q5VTL7 733 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 MEX3DQ86XN8 651 aaKnown RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 APCDD1LQ8NCL9 501 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 TOR1AIP2Q8NFQ8 470 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 SLC35B4Q969S0 331 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 GAL3ST4Q96RP7 486 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 NODALQ96S42 347 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 SEMA4CQ9C0C4 833 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 LIN28AQ9H9Z2 209 aaKnown RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 RASSF1Q9NS23 344 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 ZNF226Q9NYT6 803 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 COPS7AQ9UBW8 275 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 WDFY3Q8IZQ1 3526 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 CDC14CA4D256 554 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 SERINC4A6NH21 518 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 OR6C76A6NM76 312 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 PTGES3LE9PB15 166 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 XPNPEP2O43895 674 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 SOX14O95416 240 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 FMO3P31513 532 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 COX10Q12887 443 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 SMN1Q16637 294 aaKnown RBP19.29■□□□□ 0.68
GPC1-202ENST00000420138 DESI1Q6ICB0 168 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 FAM199XQ6PEV8 388 aaPredicted RBP19.29■□□□□ 0.68
GPC1-202ENST00000420138 TMEM205Q6UW68 189 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 ZNF730Q6ZMV8 503 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 ZNF517Q6ZMY9 492 aaPredicted RBP19.29■□□□□ 0.68
GPC1-202ENST00000420138 CMIPQ8IY22 773 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 RHOXF1Q8NHV9 184 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 FAM81AQ8TBF8 368 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 SCN3BQ9NY72 215 aa19.29■□□□□ 0.68
GPC1-202ENST00000420138 SAGE2PA6NJ88 616 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 KLF4O43474 513 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 ITIH1P19827 911 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 INSM1Q01101 510 aaPredicted RBP19.28■□□□□ 0.68
GPC1-202ENST00000420138 ALDH6A1Q02252 535 aaKnown RBP19.28■□□□□ 0.68
GPC1-202ENST00000420138 ZSWIM7Q19AV6 140 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 APOOLQ6UXV4 268 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 MBOAT2Q6ZWT7 520 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 CCDC103Q8IW40 242 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 PRR22Q8IZ63 422 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 B3GNT7Q8NFL0 401 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 SLC39A1Q9NY26 324 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 CUL9Q8IWT3 2517 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 ETV5P41161 510 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 IDH2P48735 452 aaKnown RBP19.28■□□□□ 0.68
GPC1-202ENST00000420138 NR0B1P51843 470 aaKnown RBP19.28■□□□□ 0.68
GPC1-202ENST00000420138 PIGFQ07326 219 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 NDUFAF6Q330K2 333 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 FAM198BQ6UWH4 519 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 KIF18BQ86Y91 864 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 FAM71CQ8NEG0 241 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 CMKLR1Q99788 373 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 ZNF559Q9BR84 538 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 CRB3Q9BUF7 120 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 LHPPQ9H008 270 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 UBQLN4Q9NRR5 601 aa19.28■□□□□ 0.68
GPC1-202ENST00000420138 MUC6Q6W4X9 2439 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 PIP5K1CO60331 668 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 TSPAN2O60636 221 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 NOL3O60936 208 aaKnown RBP19.27■□□□□ 0.68
GPC1-202ENST00000420138 UTS2O95399 124 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 POU1F1P28069 291 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 ADH7P40394 386 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 CLDN6P56747 220 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 CD226Q15762 336 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 FAM69BQ5VUD6 431 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 SLX4IPQ5VYV7 408 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 GTF2IRD2BQ6EKJ0 949 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 ZNF613Q6PF04 617 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 SLC29A4Q7RTT9 530 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 GTF2IRD2Q86UP8 949 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 NRMQ8IXM6 262 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 LSMEM1Q8N8F7 131 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 POGLUT1Q8NBL1 392 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 C17orf47Q8NEP4 570 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 GNPDA2Q8TDQ7 276 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms