RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PRAMEF10O60809 474 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 PDGFBP01127 241 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 HLA-DPB1P04440 258 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 IFNW1P05000 195 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 NME1P15531 152 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 UGT2B7P16662 529 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SSR2P43308 183 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 DSTNP60981 165 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 ACSM1Q08AH1 577 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SCARB2Q14108 478 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 NUDT13Q86X67 352 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 UBE2J2Q8N2K1 259 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 UXS1Q8NBZ7 420 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 OR52J3Q8NH60 311 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 GTPBP3Q969Y2 492 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 CIDECQ96AQ7 238 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 C1GALT1C1Q96EU7 318 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SHARPINQ9H0F6 387 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 LDAHQ9H6V9 325 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 COMMD3Q9UBI1 195 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 ANGPT4Q9Y264 503 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SPIN1Q9Y657 262 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 CASKO14936 926 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 CHST10O43529 356 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SDC3O75056 442 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 PPM1BO75688 479 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SCO1O75880 301 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 GASTP01350 101 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 IL3P08700 152 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 FNTBP49356 437 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 MAZP56270 477 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 UBE2IP63279 158 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 MC1RQ01726 317 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 TMEM44Q2T9K0 475 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 CRTC2Q53ET0 693 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 CD300LDQ6UXZ3 194 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 RRM2BQ7LG56 351 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 OOSP2Q86WS3 158 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 ZNF655Q8N720 491 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 OR52P1PQ8NH57 321 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 TM9SF4Q92544 642 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 SGTBQ96EQ0 304 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 MYNNQ9NPC7 610 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 ASB6Q9NWX5 421 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 ZSCAN32Q9NX65 697 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 CBLCQ9ULV8 474 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 ZNF175Q9Y473 711 aa13.78□□□□□ -0.2
SEMA4D-204ENST00000420101 MEIKINA0A087WXM9 373 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 LOC102723532A0A0G2JNH3 316 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 A0A1W2PPL8 197 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 SMLR1H3BR10 107 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 ERI3O43414 337 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 CLEC2LP0C7M8 214 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 TYRP1P17643 537 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 RAB3AP20336 220 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 RBMS1P29558 406 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 AHRP35869 848 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 RFX3P48380 749 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 XKP51811 444 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 PCBP3P57721 371 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 RPS15AP62244 130 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 MAP4K2Q12851 820 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 DOC2BQ14184 412 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 GPR176Q14439 515 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 SNAPC1Q16533 368 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 OR4C11Q6IEV9 310 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 TFAP2EQ6VUC0 442 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 LRRC28Q86X40 367 aaPredicted RBP13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 LURAP1LQ8IV03 231 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 CLECL1Q8IZS7 167 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 LINC00518Q8N0U6 118 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 MFSD9Q8NBP5 474 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 OR5T2Q8NGG2 359 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 OR52I1Q8NGK6 324 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 RFT1Q96AA3 541 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 SLC7A5P2Q9GIP4 190 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 OR51J1Q9H342 316 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 B3GAT2Q9NPZ5 323 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 RDH8Q9NYR8 311 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 ENTPD2Q9Y5L3 495 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 NPTNQ9Y639 398 aa13.77□□□□□ -0.21
SEMA4D-204ENST00000420101 FAM221BA6H8Z2 402 aa13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 LAMTOR5O43504 91 aa13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 HPGDSO60760 199 aa13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 NUDT7P0C024 238 aa13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 BSGP35613 385 aa13.76□□□□□ -0.21
SEMA4D-204ENST00000420101 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms