RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DNAJC13O75165 2243 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 NOTCH2Q04721 2471 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 A0A087WV62 115 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 A0A1B0GVC2 190 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM114B3SHH9 223 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 E9PLN8 166 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 UPK1AO00322 258 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PLOD2O00469 737 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ADAM10O14672 748 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 BIRC5O15392 142 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 HOXA3O43365 443 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ITM2AO43736 263 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PEX11AO75192 247 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 COQ9O75208 318 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 UGT2B11O75310 529 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 TRIM3O75382 744 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ERN1O75460 977 aaKnown RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 LYPLA1O75608 230 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 SNX4O95219 450 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ZWINTO95229 277 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PSMG1O95456 288 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 HSPA4LO95757 839 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 HRGP04196 525 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 SERPINE1P05121 402 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ABCB1P08183 1280 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 RFPL3SP0C7P2 107 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 CT45A8P0DMV1 189 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 CT45A9P0DMV2 189 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 BCKDHAP12694 445 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 CASP3P42574 277 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ASMTP46597 345 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ABCE1P61221 599 aaKnown RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PSPHP78330 225 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 NKX6-1P78426 367 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF155Q12901 538 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 CHI3L2Q15782 390 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ATP6AP1LQ52LC2 224 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 CT45A2Q5DJT8 189 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 C6orf136Q5SQH8 315 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 BEND6Q5SZJ8 279 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 NPSR1Q6W5P4 371 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 C3P1Q6ZMU1 363 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 MRGPRGQ86SM5 289 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 OR2L13Q8N349 312 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF808Q8N4W9 903 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF781Q8N8C0 355 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PHF10Q8WUB8 498 aaKnown RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 TMBIM1Q969X1 311 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 CIDECQ96AQ7 238 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 SLC35A4Q96G79 324 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM41AQ96HV5 264 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 PPP3R2Q96LZ3 170 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 C3orf30Q96M34 536 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 JSRP1Q96MG2 331 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 NODALQ96S42 347 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 VKORC1Q9BQB6 163 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 C1orf50Q9BV19 199 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ANGPTL4Q9BY76 406 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 NELFAQ9H3P2 528 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 GLIPR2Q9H4G4 154 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 REEP4Q9H6H4 257 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 METTL7AQ9H8H3 244 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 KCNK9Q9NPC2 374 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 DDX18Q9NVP1 670 aaKnown RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 TAS2R9Q9NYW1 312 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 SPRR3Q9UBC9 169 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 B4GALT7Q9UBV7 327 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 BAIAP2L1Q9UHR4 511 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 C19orf53Q9UNZ5 99 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-205ENST00000419378 C15orf41Q9Y2V0 281 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 NCKAP5O14513 1909 aa6.31□□□□□ -1.4
HMGN1-205ENST00000419378 ITPR2Q14571 2701 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TRGV5A0A0B4J1U4 118 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM120BA0PK00 339 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 OR6C70A6NIJ9 312 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 NPIPA2E9PIF3 369 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 NPIPA3F8WFD2 350 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 BCKDKO14874 412 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TSPAN2O60636 221 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 HCN1O60741 890 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TBX19O60806 448 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 IFI6P09912 130 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 AGAP20933 346 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 BGNP21810 368 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ELAVL4P26378 380 aaKnown RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 GDF1P27539 372 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 HPCAL1P37235 193 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 PTGDSP41222 190 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 MAN2A2P49641 1150 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 CDK9P50750 372 aaKnown RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SMSP52788 366 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 RAB1AP62820 205 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 PSG6Q00889 435 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 HSPB3Q12988 150 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SNTA1Q13424 505 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 PTGR1Q14914 329 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SLC10A1Q14973 349 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms