RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 RAB21Q9UL25 225 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 A0A087WZY1 265 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 SCDO00767 359 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 TNFSF11O14788 317 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ANKRD28O15084 1053 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 RGS16O15492 202 aaPredicted RBP13.53□□□□□ -0.24
UBXN4-203ENST00000416538 CXCL13O43927 109 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
UBXN4-203ENST00000416538 SCN2BO60939 215 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 PRPS1L1P21108 318 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 BGNP21810 368 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 LOXP28300 417 aaPredicted RBP13.53□□□□□ -0.24
UBXN4-203ENST00000416538 LCN1P31025 176 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 SOAT1P35610 550 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 CLDN8P56748 225 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ABCE1P61221 599 aaKnown RBP13.53□□□□□ -0.24
UBXN4-203ENST00000416538 EMX2Q04743 252 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 KLHL26Q53HC5 615 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 MBD6Q96DN6 1003 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 CHMP6Q96FZ7 201 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 AKTIPQ9H8T0 292 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 KCNE5Q9UJ90 142 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ICAM5Q9UMF0 924 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 NF1P21359 2839 aa13.53□□□□□ -0.24
UBXN4-203ENST00000416538 ADAMDEC1O15204 470 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 RAF1P04049 648 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 CD8BP10966 210 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 DNASE1P24855 282 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 UGT2B10P36537 528 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 ZNF41P51814 821 aaPredicted RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 RIPPLY3P57055 190 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 EEFSECP57772 596 aaKnown RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 RPS3AP61247 264 aaKnown RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 OCRLQ01968 901 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 FUT5Q11128 374 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 FOXD4Q12950 439 aaPredicted RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 SPDYE7PQ495Y7 208 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 CEP85LQ5SZL2 805 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 FAM214BQ7L5A3 538 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 TGIF2LYQ8IUE0 185 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 OR2V1Q8NHB1 315 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 PHOSPHO1Q8TCT1 267 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 ADAMTS15Q8TE58 950 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 ZBTB8AQ96BR9 441 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 SRXN1Q9BYN0 137 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 COQ10BQ9H8M1 238 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 SSU72Q9NP77 194 aaKnown RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.25
UBXN4-203ENST00000416538 HAO1Q9UJM8 370 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 CARD8Q9Y2G2 431 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.25
UBXN4-203ENST00000416538 CADP27708 2225 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 ESPNB1AK53 854 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 BIRC5O15392 142 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 CFLARO15519 480 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 SS18L1O75177 396 aaPredicted RBP13.51□□□□□ -0.25
UBXN4-203ENST00000416538 BCAS1O75363 584 aaPredicted RBP13.51□□□□□ -0.25
UBXN4-203ENST00000416538 GOSR1O95249 250 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 FCGR2AP12318 317 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 POU2F1P14859 743 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 CD53P19397 219 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 SFTPDP35247 375 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 SLC1A6P48664 564 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 PCYT1AP49585 367 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 CASP9P55211 416 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 RAC1P63000 192 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 EEF1A1P68104 462 aaKnown RBP13.51□□□□□ -0.25
UBXN4-203ENST00000416538 PLAURQ03405 335 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 SGCBQ16585 318 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 EEF1A1P5Q5VTE0 462 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 MISPQ8IVT2 679 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 WDR75Q8IWA0 830 aaKnown RBP13.51□□□□□ -0.25
UBXN4-203ENST00000416538 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 PPP1R14CQ8TAE6 165 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 KLHL15Q96M94 604 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 SDF2Q99470 211 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 NUF2Q9BZD4 464 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 DLL4Q9NR61 685 aa13.51□□□□□ -0.25
UBXN4-203ENST00000416538 FAF1Q9UNN5 650 aaPredicted RBP13.51□□□□□ -0.25
UBXN4-203ENST00000416538 EIF3LQ9Y262 564 aaKnown RBP13.51□□□□□ -0.25
UBXN4-203ENST00000416538 C9JVG2 144 aa13.5□□□□□ -0.25
UBXN4-203ENST00000416538 TM9SF1O15321 606 aa13.5□□□□□ -0.25
UBXN4-203ENST00000416538 DIAPH2O60879 1101 aa13.5□□□□□ -0.25
UBXN4-203ENST00000416538 NTN1O95631 604 aa13.5□□□□□ -0.25
UBXN4-203ENST00000416538 THBDP07204 575 aa13.5□□□□□ -0.25
UBXN4-203ENST00000416538 ALDOCP09972 364 aaKnown RBP13.5□□□□□ -0.25
UBXN4-203ENST00000416538 HPGDP15428 266 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms