RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 SHC1P29353 583 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 NTSP30990 170 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 HPCAL1P37235 193 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 RFX3P48380 749 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 LTBQ06643 244 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 HSPB3Q12988 150 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 CAPRIN1Q14444 709 aaKnown RBP11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 CD226Q15762 336 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 FBXW10Q5XX13 1052 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 MFSD12Q6NUT3 480 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 FIGNL1Q6PIW4 674 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 P4HA3Q7Z4N8 544 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 R3HCC1LQ7Z5L2 792 aaKnown RBP11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 MEIOBQ8N635 442 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 NUP43Q8NFH3 380 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 CKAP2Q8WWK9 683 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 PIK3IP1Q96FE7 263 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 PIP5K1AQ99755 562 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 Q9N2J8 555 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 EQTNQ9NQ60 294 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 SDHAF3Q9NRP4 125 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 ELOVL5Q9NYP7 299 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 NOP53Q9NZM5 478 aaKnown RBP11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 NDRG3Q9UGV2 375 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 CLEC4AQ9UMR7 237 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 VDAC3Q9Y277 283 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 ROS1P08922 2347 aa11.13□□□□□ -0.63
NCKIPSD-203ENST00000415281 ARID1AO14497 2285 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 LINC01387J3KSC0 135 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 SCAMP2O15127 329 aaKnown RBP11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 ADAMDEC1O15204 470 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 LY6G6DO95868 133 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 PLAUP00749 431 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 INHBBP09529 407 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 LINGO3P0C6S8 592 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 LAMP1P11279 417 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 GPC1P35052 558 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 MANFP55145 182 aaKnown RBP11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 NME5P56597 212 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 CLDN8P56748 225 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 ACKR1Q16570 336 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 SMU1Q2TAY7 513 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 SLC9B1Q4ZJI4 515 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 CCNJQ5T5M9 372 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 CPTPQ5TA50 214 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 STAC2Q6ZMT1 411 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 MAVSQ7Z434 540 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 BIVMQ86UB2 503 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 LRRC75A-AS1Q8N1F1 130 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 GTPBP8Q8N3Z3 284 aaPredicted RBP11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 GATSQ8NAP1 163 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 FBXO30Q8TB52 745 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 GPR151Q8TDV0 419 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 SLC9A6Q92581 669 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 MTERF3Q96E29 417 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 C7orf26Q96N11 449 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 NEUROD4Q9HD90 331 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 ATP6V1HQ9UI12 483 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 USH1CQ9Y6N9 552 aa11.12□□□□□ -0.63
NCKIPSD-203ENST00000415281 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 A0A1W2PRB8 838 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 C7orf72A4D263 438 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 C16orf97H3BN30 126 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZNF195O14628 629 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 CASKO14936 926 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 ATP8B1O43520 1251 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 CXCL13O43927 109 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 SS18L1O75177 396 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 ALDOCP09972 364 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 POU2F1P14859 743 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 PRPS1L1P21108 318 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 RPL3P39023 403 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 PRKAG1P54619 331 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 EEFSECP57772 596 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 PLPPR5Q32ZL2 321 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 SHEQ5VZ18 495 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 CBLN3Q6UW01 205 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 SPATA19Q7Z5L4 167 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 LSRQ86X29 649 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 RIMKLAQ8IXN7 391 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 CDRT4Q8N9R6 151 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 LILRB1Q8NHL6 650 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 FAM120BQ96EK7 910 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZBED6CLQ96FA7 236 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 THOC1Q96FV9 657 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 COX4I2Q96KJ9 171 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 OR52B2Q96RD2 323 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 PRPF18Q99633 342 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 DPY30Q9C005 99 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 PTGES2Q9H7Z7 377 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 ACSS1Q9NUB1 689 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 MED17Q9NVC6 651 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms