RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 HSDL2Q6YN16 418 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 CBLL1Q75N03 491 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 SLC29A4Q7RTT9 530 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 COMTD1Q86VU5 262 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF441Q8N8Z8 693 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 HDAC2Q92769 488 aaKnown RBP14.31□□□□□ -0.12
SHMT2-202ENST00000414700 LCORQ96JN0 433 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-202ENST00000414700 MUS81Q96NY9 551 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 CPNE5Q9HCH3 593 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 Q9N2J8 555 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 CBLCQ9ULV8 474 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 WDR45Q9Y484 360 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 PCDHGA6Q9Y5G7 932 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 PEX12O00623 359 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 UMPSP11172 480 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 TRHRP34981 398 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ST13P50502 369 aaKnown RBP14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ATP1A1-AS1Q5TC04 95 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 MRGPREQ86SM8 312 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 SLC22A16Q86VW1 577 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ARMC8Q8IUR7 673 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 SLC30A8Q8IWU4 369 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 BCORP1Q8N888 145 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ELP5Q8TE02 316 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 CAPSLQ8WWF8 208 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF486Q96H40 463 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-202ENST00000414700 HSH2DQ96JZ2 352 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 WFDC6Q9BQY6 131 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 SP140LQ9H930 580 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 P4HTMQ9NXG6 502 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 ANAPC2Q9UJX6 822 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 KCND3Q9UK17 655 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 FBXL4Q9UKA2 621 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 CFL2Q9Y281 166 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 PCDHGB3Q9Y5G1 929 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 NCOR2Q9Y618 2525 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 EXPH5Q8NEV8 1989 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 NSG1A0A0A6YYJ2 146 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 A0A0G2JPF8 293 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 A0A1W2PQ72 361 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 CLDN24A6NM45 220 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 OR6C76A6NM76 312 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 HNRNPCL2B2RXH8 293 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 HNRNPCL3B7ZW38 293 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 STX11O75558 287 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 IGHEP01854 428 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 HNRNPCL4P0DMR1 293 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 BMP4P12644 408 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 DRD5P21918 477 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 NR4A1P22736 598 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 SERPINB10P48595 397 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 SELENOWP63302 87 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 Q0VFX4 171 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 MAPK14Q16539 360 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 CTF1Q16619 201 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 EIF3MQ7L2H7 374 aaKnown RBP14.3□□□□□ -0.12
SHMT2-202ENST00000414700 NDUFAF7Q7L592 441 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 THAP5Q7Z6K1 395 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 SNX29P2Q8IUI4 249 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 GPR32P1Q8NGA4 272 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 BBS10Q8TAM1 723 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 ADAMTS17Q8TE56 1095 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 TMBIM1Q969X1 311 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 NXPE2Q96DL1 559 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 RNF145Q96MT1 663 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 BAG5Q9UL15 447 aa14.3□□□□□ -0.12
SHMT2-202ENST00000414700 SAMD4AQ9UPU9 718 aaKnown RBP14.3□□□□□ -0.12
SHMT2-202ENST00000414700 PRAMEF25A6NGN4 478 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 FRG2CA6NGY1 282 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 WWP2O00308 870 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 SUV39H1O43463 412 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 WT1P19544 449 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-202ENST00000414700 OR1E2P47887 323 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 GNA13Q14344 377 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 HLA-DQA1Q5Y7H0 255 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 PLAG1Q6DJT9 500 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 VRK2Q86Y07 508 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 LACC1Q8IV20 430 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 PYURFQ96I23 114 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 ADNPQ9H2P0 1102 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 SEC14L3Q9UDX4 400 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF229Q9UJW7 825 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 CHST2Q9Y4C5 530 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF451Q9Y4E5 1061 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 SLC22A1O15245 554 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 EPPINO95925 133 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 KCNJ10P78508 379 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 DGUOKQ16854 277 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 SLX4IPQ5VYV7 408 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 TCTN3Q6NUS6 607 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 FKBP9P1Q75LS8 142 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 C8orf59Q8N0T1 100 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-202ENST00000414700 EID3Q8N140 333 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 OR6Q1Q8NGQ2 317 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 SLC47A1Q96FL8 570 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF607Q96SK3 696 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 DOHHQ9BU89 302 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 SAP130Q9H0E3 1048 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 RLIMQ9NVW2 624 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 ADPRHL2Q9NX46 363 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms