RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 KCNE5Q9UJ90 142 aa13.36□□□□□ -0.27
LIMS4-201ENST00000413601 CARD8Q9Y2G2 431 aa13.36□□□□□ -0.27
LIMS4-201ENST00000413601 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
LIMS4-201ENST00000413601 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
LIMS4-201ENST00000413601 H3BNH8 94 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 GTPBP1O00178 669 aaKnown RBP13.35□□□□□ -0.27
LIMS4-201ENST00000413601 TNFRSF21O75509 655 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 NUDT14O95848 222 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 OPN1LWP04000 364 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 IL6P05231 212 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ZNF17P17021 662 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 UQCRC1P31930 480 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 OPRM1P35372 400 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 KHKP50053 298 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 IDH3AP50213 366 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ASCL1P50553 236 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 EEFSECP57772 596 aaKnown RBP13.35□□□□□ -0.27
LIMS4-201ENST00000413601 FUT5Q11128 374 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ATAD3BQ5T9A4 648 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 P4HA3Q7Z4N8 544 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 RNF130Q86XS8 419 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 GTPBP8Q8N3Z3 284 aaPredicted RBP13.35□□□□□ -0.27
LIMS4-201ENST00000413601 TRIML2Q8N7C3 387 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 OR9I1Q8NGQ6 314 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ZBTB8AQ96BR9 441 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 RNF145Q96MT1 663 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ZFP3Q96NJ6 502 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 EBF4Q9BQW3 602 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 PINK1Q9BXM7 581 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 NMUR2Q9GZQ4 415 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ICAM5Q9UMF0 924 aa13.35□□□□□ -0.27
LIMS4-201ENST00000413601 ADGRG4Q8IZF6 3080 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 CENPVL1A0A0U1RR11 272 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 SLC22A20A6NK97 555 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 EEF1E1-BLOC1S5C9J1V9 151 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 SYT5O00445 386 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 HMGN4O00479 90 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 RFXANKO14593 260 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 EEF1E1O43324 174 aaKnown RBP13.34□□□□□ -0.27
LIMS4-201ENST00000413601 TGDSO95455 350 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 AGR2O95994 175 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 IL18BPO95998 194 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 PSMA4P25789 261 aaKnown RBP13.34□□□□□ -0.27
LIMS4-201ENST00000413601 SSTR2P30874 369 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 P2RX1P51575 399 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 POLR2JP52435 117 aaKnown RBP13.34□□□□□ -0.27
LIMS4-201ENST00000413601 LRRC74AQ0VAA2 488 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 ZNF141Q15928 474 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 GGNQ86UU5 652 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 MIER2Q8N344 545 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 RFWD2Q8NHY2 731 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 POC1BQ8TC44 478 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 PNPT1Q8TCS8 783 aaKnown RBP13.34□□□□□ -0.27
LIMS4-201ENST00000413601 FIG4Q92562 907 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 ROPN1LQ96C74 230 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 C14orf79Q96F83 325 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 ZNF845Q96IR2 970 aaPredicted RBP13.34□□□□□ -0.27
LIMS4-201ENST00000413601 ZNF350Q9GZX5 532 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 TCF7L2Q9NQB0 619 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 SLC6A13Q9NSD5 602 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 STOML1Q9UBI4 398 aa13.34□□□□□ -0.27
LIMS4-201ENST00000413601 MPDZO75970 2070 aa13.33□□□□□ -0.27
LIMS4-201ENST00000413601 PRAMEF27A3QJZ7 478 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 C7orf72A4D263 438 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 EIF1AYO14602 144 aaKnown RBP13.33□□□□□ -0.28
LIMS4-201ENST00000413601 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.28
LIMS4-201ENST00000413601 ZNF264O43296 627 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 UGT2B17O75795 530 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 UBL4AP11441 157 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 IL11P20809 199 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 AQP5P55064 265 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 RPS3AP61247 264 aaKnown RBP13.33□□□□□ -0.28
LIMS4-201ENST00000413601 TLE4Q04727 773 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 PON3Q15166 354 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 TOMM34Q15785 309 aaPredicted RBP13.33□□□□□ -0.28
LIMS4-201ENST00000413601 MAPK14Q16539 360 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 SGCBQ16585 318 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 FBXL19-AS1Q494R0 122 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 GPAT3Q53EU6 434 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 COX20Q5RI15 118 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 TYW3Q6IPR3 259 aaKnown RBP13.33□□□□□ -0.28
LIMS4-201ENST00000413601 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
LIMS4-201ENST00000413601 TMCO5AQ8N6Q1 288 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 METTL25Q8N6Q8 603 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 GPR119Q8TDV5 335 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 VPS33AQ96AX1 596 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 ZNF524Q96C55 264 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 LRRC46Q96FV0 321 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 MAGEB18Q96M61 343 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 SFXN3Q9BWM7 321 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 TMEM185BQ9H7F4 350 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 JKAMPQ9P055 326 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 L3MBTL1Q9Y468 752 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 WDR45Q9Y484 360 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 DCHS2Q6V1P9 2916 aa13.33□□□□□ -0.28
LIMS4-201ENST00000413601 APCP25054 2843 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms