RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 UBE2TQ9NPD8 197 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 PDP1Q9P0J1 537 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 MBD2Q9UBB5 411 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 TUBGCP4Q9UGJ1 667 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 PURGQ9UJV8 347 aaKnown RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 PACSIN2Q9UNF0 486 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 WDR7Q9Y4E6 1490 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 POGZQ7Z3K3 1410 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 PNPLA6Q8IY17 1366 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ZNF879B4DU55 563 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 NPIPA7E9PJI5 369 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 K7EQD1 137 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 OR7A17O14581 309 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 TRDMT1O14717 391 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 NMT2O60551 498 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 N4BP1O75113 896 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 B3GAT3O94766 335 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 STAMBPO95630 424 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 IGF1P05019 195 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ZSCAN5DPP0CG00 497 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 NPIPA8P0DM63 369 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 CASP14P31944 242 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 RDXP35241 583 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 SLC1A4P43007 532 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 MAGEA5P43359 124 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 PGFP49763 221 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 RAB9AP51151 201 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 DHODHQ02127 395 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 BDH1Q02338 343 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 CHI3L2Q15782 390 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ALKBH6Q3KRA9 238 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 BSPRYQ5W0U4 402 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 FRRS1Q6ZNA5 592 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 H2BFWTQ7Z2G1 175 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ALLCQ8N6M5 410 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 Q8N9G6 341 aaPredicted RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 MFSD9Q8NBP5 474 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ZNF248Q8NDW4 579 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 OR51G2Q8NGK0 314 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 OR9A1PQ8NGU1 263 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 C11orf45Q8TAV5 145 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 LRRC15Q8TF66 581 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 GLYATL2Q8WU03 294 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 C10orf35Q96D05 121 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 PRRC1Q96M27 445 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 TGS1Q96RS0 853 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 CENPKQ9BS16 269 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 BLZF1Q9H2G9 400 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 ANKRA2Q9H9E1 313 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 POLE4Q9NR33 117 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 CHRAC1Q9NRG0 131 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 MRPL22Q9NWU5 206 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 NPIPA1Q9UND3 350 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 EIF3LQ9Y262 564 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 NOSIPQ9Y314 301 aaKnown RBP4.29□□□□□ -1.72
LSM5-206ENST00000409987 MAD1L1Q9Y6D9 718 aa4.29□□□□□ -1.72
LSM5-206ENST00000409987 TCF20Q9UGU0 1960 aaKnown RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 IGHV3-20A0A0C4DH32 117 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 LRIT2A6NDA9 550 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 CST1P01037 141 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 FTH1P02794 183 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 FHP07954 510 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ETS2P15036 469 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ANXA13P27216 316 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 PDHA2P29803 388 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 HPCAL1P37235 193 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 NAMPTP43490 491 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 RPS5P46782 204 aaKnown RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 RGS19P49795 217 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ATP12AP54707 1039 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 CDH6P55285 790 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 RAG2P55895 527 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 IL9RQ01113 521 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 RIGQ13278 110 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 SYCP1Q15431 976 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 CHRNA6Q15825 494 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 MTHFSDQ2M296 383 aaKnown RBP4.28□□□□□ -1.72
LSM5-206ENST00000409987 SNAI3Q3KNW1 292 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 LIN9Q5TKA1 542 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 AGAP7PQ5VUJ5 663 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 RHBDD2Q6NTF9 364 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 MOB3BQ86TA1 216 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ZNF614Q8N883 585 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 HCAR2Q8TDS4 363 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 ELMO1Q92556 727 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 LHX4Q969G2 390 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 SLC38A4Q969I6 547 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 TM4SF19Q96DZ7 209 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 NSMCE3Q96MG7 304 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 AGAP4Q96P64 663 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 TECTBQ96PL2 329 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 CPXM1Q96SM3 734 aa4.28□□□□□ -1.72
LSM5-206ENST00000409987 TTYH2Q9BSA4 534 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms