RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SQLEQ14534 574 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 EXOSC6Q5RKV6 272 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ARMC4Q5T2S8 1044 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 C9orf57Q5W0N0 161 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ZDHHC20Q5W0Z9 365 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PLD3Q8IV08 490 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PACRGLQ8N7B6 248 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PNLDC1Q8NA58 520 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 C9orf43Q8TAL5 461 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 FAM174AQ8TBP5 190 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 METTL6Q8TCB7 284 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 KISS1RQ969F8 398 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 KIAA1191Q96A73 305 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 RSPRY1Q96DX4 576 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 RHOVQ96L33 236 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 AARSD1Q9BTE6 412 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 SLC12A9Q9BXP2 914 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TM6SF2Q9BZW4 377 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 MMP27Q9H306 513 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PRDM13Q9H4Q3 707 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TRAV14DV4A0A0A6YYC5 116 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ISPDA4D126 451 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 OR6C68A6NDL8 312 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 KPNA7A9QM74 516 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 DCTN6O00399 190 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 RFXANKO14593 260 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 KLK10O43240 276 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 HCRTR1O43613 425 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PDE9AO76083 593 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 LTA4HP09960 611 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 VSIG10L2P0DP72 767 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 M6PRP20645 277 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 MMP11P24347 488 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TRHRP34981 398 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ERVK-8P63133 956 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 GABREP78334 506 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 SRSF11Q05519 484 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 IL10RBQ08334 325 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TUBA3CQ13748 450 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 SPHARQ15513 63 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 RAB41Q5JT25 222 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 C6orf163Q5TEZ5 329 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TIGD7Q6NT04 549 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 CD200R1LQ6Q8B3 271 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 LIX1LQ8IVB5 337 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PGBD3Q8N328 593 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 OR5D16Q8NGK9 328 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 OR6T1Q8NGN1 323 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 UTP15Q8TED0 518 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 DUSP19Q8WTR2 217 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 GATAD2BQ8WXI9 593 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 CREB3L1Q96BA8 519 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 GABRG3Q99928 467 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PDCD1LG2Q9BQ51 273 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 WDR77Q9BQA1 342 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 NFKBIZQ9BYH8 718 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 LDAHQ9H6V9 325 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 NMNAT1Q9HAN9 279 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 C20orf141Q9NUB4 165 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 RBFOX1Q9NWB1 397 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 NKIRAS2Q9NYR9 191 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 KCNE1BA0A087WTH5 132 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 RGS10O43665 173 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ASNA1O43681 348 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 EIF4E2O60573 245 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TPPPO94811 219 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ZNF205O95201 554 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TNNI3P19429 210 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ACHEP22303 614 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 MAPKAPK2P49137 400 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 STK19P49842 368 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 SERPINB9P50453 376 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PRKCDQ05655 676 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 CDH17Q12864 832 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 FHL1Q13642 323 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ZRSR2Q15696 482 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 MAPKAPK3Q16644 382 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TDRG1Q3Y452 100 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ACER2Q5QJU3 275 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 KIAA0930Q6ICG6 404 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 USP53Q70EK8 1073 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 LRP11Q86VZ4 500 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 OR8H3Q8N146 312 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 SIRT6Q8N6T7 355 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ZPLD1Q8TCW7 415 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ING5Q8WYH8 240 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 FCRL5Q96RD9 977 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 CIPCQ9C0C6 399 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 LAT2Q9GZY6 243 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 CCSER2Q9H7U1 834 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 PDFQ9HBH1 243 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 EML4Q9HC35 981 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ZNF581Q9P0T4 197 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ING1Q9UK53 422 aaPredicted RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 MRTO4Q9UKD2 239 aaKnown RBP2.87□□□□□ -1.95
RGPD3-202ENST00000409886 FAM96BQ9Y3D0 163 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 CSNK1G3Q9Y6M4 447 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 TRBV23OR9-2A0A075B6M9 112 aa2.87□□□□□ -1.95
RGPD3-202ENST00000409886 ELOVL7A1L3X0 281 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms