RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CLDN20P56880 219 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PON3Q15166 354 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PDCD2Q16342 344 aaPredicted RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PLPPR5Q32ZL2 321 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 FBXW10Q5XX13 1052 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 OGFOD2Q6N063 350 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 C6orf120Q7Z4R8 191 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 CNEP1R1Q8N9A8 125 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 CHDHQ8NE62 594 aaPredicted RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 TOR1AIP2Q8NFQ8 470 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 LINC01560Q8TB33 94 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PHOSPHO1Q8TCT1 267 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 MIPOL1Q8TD10 442 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 GMPPAQ96IJ6 420 aaPredicted RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF845Q96IR2 970 aaPredicted RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PKNOX2Q96KN3 472 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 MEAF6Q9HAF1 191 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 POLE3Q9NRF9 147 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PLSCR4Q9NRQ2 329 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 FBXO34Q9NWN3 711 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF226Q9NYT6 803 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 ST6GALNAC2Q9UJ37 374 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PRDM4Q9UKN5 801 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 VDAC3Q9Y277 283 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 EMC9Q9Y3B6 208 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 SH3D21A4FU49 640 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 TRPC5OSA6NMA1 111 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 C17orf51A8MQB3 221 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 EIF1AYO14602 144 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 SEC14L5O43304 696 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 STX11O75558 287 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 SYNGR4O95473 234 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 CGAP01215 116 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 LINGO3P0C6S8 592 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 EFNA1P20827 205 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 UQCRC2P22695 453 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 EIF1AXP47813 144 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 ART1P52961 327 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 SNTB1Q13884 538 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 MPP2Q14168 576 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 ARHGAP11BQ3KRB8 267 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 CCNJQ5T5M9 372 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 ATG16L1Q676U5 607 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 SPATA19Q7Z5L4 167 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 GGNQ86UU5 652 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 FBXO30Q8TB52 745 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 FNDC9Q8TBE3 224 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 FIG4Q92562 907 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 REXO5Q96IC2 774 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 OR7D2Q96RA2 312 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 SDF2Q99470 211 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 SORT1Q99523 831 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 C20orf27Q9GZN8 174 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 GP6Q9HCN6 339 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 ICAM5Q9UMF0 924 aa13.06□□□□□ -0.32
NIF3L1-205ENST00000409588 MED12Q93074 2177 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 NPIPB9F8W1W9 429 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 SMNDC1O75940 238 aaKnown RBP eCLIP13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 PLGP00747 810 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 PPP3CBP16298 524 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 BGNP21810 368 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 FKBP2P26885 142 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 IST1P53990 364 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 CARD18P57730 90 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 ATAD3BQ5T9A4 648 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 OR4F3Q6IEY1 312 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 BTLAQ7Z6A9 289 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 ZAR1Q86SH2 424 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 GALNT10Q86SR1 603 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 TRIML2Q8N7C3 387 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 OR5M1Q8NGP8 315 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 OR6K3Q8NGY3 331 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 OR10D3Q8NH80 312 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 OR2V1Q8NHB1 315 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 PMM1Q92871 262 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 ARSGQ96EG1 525 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 MRGPRX4Q96LA9 322 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 PAIP2Q9BPZ3 127 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 BTNL2Q9UIR0 455 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 PROCRQ9UNN8 238 aa13.05□□□□□ -0.32
NIF3L1-205ENST00000409588 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 H0YC42 278 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ANKRD28O15084 1053 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 HDAC3O15379 428 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF264O43296 627 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 SCN2BO60939 215 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 NUDT14O95848 222 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 POU2F1P14859 743 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms