RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MBD3L5A6NJ08 208 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 HNRNPRO43390 633 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 UGT2B17O75795 530 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 GUSBP08236 651 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 SNRPB2P08579 225 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 COX6B1P14854 86 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 P2RX1P51575 399 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 EEFSECP57772 596 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 IRX1P78414 480 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 HPCAP84074 193 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 FUT5Q11128 374 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 SQLEQ14534 574 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 AGKQ53H12 422 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 TYW3Q6IPR3 259 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 ADGRE4PQ86SQ3 457 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 FUNDC1Q8IVP5 155 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 GTPBP8Q8N3Z3 284 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 NAXEQ8NCW5 288 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 MBD3L2Q8NHZ7 208 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 STON2Q8WXE9 905 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 SMPDL3BQ92485 455 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 GTF2H4Q92759 462 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 KLHDC3Q9BQ90 382 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 TPT1P8Q9HAU6 139 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 ICAM5Q9UMF0 924 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 LIPT1Q9Y234 373 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 AP4B1Q9Y6B7 739 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 PRAMEF27A3QJZ7 478 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 NR5A2O00482 541 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 ZNF264O43296 627 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 SEC14L5O43304 696 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 ATP8B1O43520 1251 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 KIAA0513O60268 411 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 EIF4E2O60573 245 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 H6PDO95479 791 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 UBL4AP11441 157 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 ZNF17P17021 662 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 CRATP43155 626 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 SUCLG1P53597 346 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 SYPL1Q16563 259 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 PLPPR5Q32ZL2 321 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 NDUFAF6Q330K2 333 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 SLC25A35Q3KQZ1 300 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 GTDC1Q4AE62 458 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 PLXDC2Q6UX71 529 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 ZNF619Q8N2I2 560 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 TMCO5AQ8N6Q1 288 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 ANKFN1Q8N957 763 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 C9orf106Q8NAJ2 232 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 WNT2BQ93097 391 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 MARVELD3Q96A59 401 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 SPDL1Q96EA4 605 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 TRNT1Q96Q11 434 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 TM9SF2Q99805 663 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 SAP130Q9H0E3 1048 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 RABEP2Q9H5N1 569 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 TMEM45AQ9NWC5 275 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 TRIM33Q9UPN9 1127 aa16.19■□□□□ 0.18
PDLIM2-206ENST00000409141 ARHGAP21Q5T5U3 1957 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 CENPVL1A0A0U1RR11 272 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 C7orf72A4D263 438 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 H0YC42 278 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 DVL2O14641 736 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 CYP7B1O75881 506 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 CSTAP01040 98 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 NR2F1P10589 423 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 BMP5P22003 454 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 MAGEA8P43361 318 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 TPD52P55327 224 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 SUMO3P55854 103 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 CLDN15P56746 228 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 CLDN20P56880 219 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 CHRNEQ04844 493 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 MAPK14Q16539 360 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 FRRS1Q6ZNA5 592 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 EIF3MQ7L2H7 374 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 GRAMD2AQ8IUY3 354 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 TOR1AIP2Q8NFQ8 470 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 GPR119Q8TDV5 335 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 ZG16BQ96DA0 208 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 AURKBQ96GD4 344 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 RNF145Q96MT1 663 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 UCN2Q96RP3 112 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 NPAS1Q99742 590 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 PAIP1Q9H074 479 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 RUBCNLQ9H714 662 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 ZNF629Q9UEG4 869 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 PCDHB14Q9Y5E9 798 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 NOTCH2Q04721 2471 aa16.18■□□□□ 0.18
PDLIM2-206ENST00000409141 VIMP08670 466 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 LINGO3P0C6S8 592 aa16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 TROVE2P10155 538 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 EIF1P41567 113 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 CCR4P51679 360 aa16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 ZNF136P52737 540 aa16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 MVDP53602 400 aa16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 RPS3AP61247 264 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 GUCY1A3Q02108 690 aa16.17■□□□□ 0.18
PDLIM2-206ENST00000409141 LRRC74BQ6ZQY2 392 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms