RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 HNRNPA1P09651 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 MAGEB1P43366 347 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 E2F1Q01094 437 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 NDUFAF6Q330K2 333 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 CEP78Q5JTW2 689 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 FAM205BPQ63HN1 556 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 OR8K3Q8NH51 312 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 ERMAPQ96PL5 475 aaPredicted RBP11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 APOOQ9BUR5 198 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 CDCP1Q9H5V8 836 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 CALML5Q9NZT1 146 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 SPEGQ15772 3267 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 FAM172BPA6NC97 362 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 OR2B3O76000 313 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 CEACAM5P06731 702 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 CRYZQ08257 329 aaKnown RBP11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 CRMP1Q14194 572 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF836Q6ZNA1 936 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 PRSS58Q8IYP2 241 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 OR52E2Q8NGJ4 325 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 DEDD2Q8WXF8 326 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 ARHGAP9Q9BRR9 750 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 TMEM27Q9HBJ8 222 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 TMEM74BQ9NUR3 256 aa11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 TDRD6O60522 2096 aaKnown RBP11.8□□□□□ -0.52
PPP4R1-202ENST00000400555 IQCMA0A1B0GVH7 501 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 GXYLT2A0PJZ3 443 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SGK494L7N484 410 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF24P17028 368 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 BMP8BP34820 402 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TFF2Q03403 129 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 ADAM15Q13444 863 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SFRP4Q6FHJ7 346 aaPredicted RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 RASSF6Q6ZTQ3 369 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 PRSS45Q7RTY3 260 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 BMP8AQ7Z5Y6 402 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 OR4M1Q8NGD0 313 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 OR5W2Q8NH69 310 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TNFRSF13CQ96RJ3 184 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 PLA2G2FQ9BZM2 168 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SIDT1Q9NXL6 827 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 MRPS2Q9Y399 296 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SPACA6W5XKT8 324 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 PLXNB3Q9ULL4 1909 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 A8MUA0 341 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TBXA2RP21731 343 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 CLDN12P56749 244 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 PPP2CBP62714 309 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 PPP2CAP67775 309 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 CDK10Q15131 360 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 OR1Q1Q15612 314 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 CLDN22Q8N7P3 220 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SETD6Q8TBK2 473 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TMEM239Q8WW34 195 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 RAB7BQ96AH8 199 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 GSDMCQ9BYG8 508 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TESQ9UGI8 421 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 GNG8Q9UK08 70 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TRIOO75962 3097 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 IRGMA1A4Y4 181 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 CASC3O15234 703 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 MAKP20794 623 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SOX2P48431 317 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 RPS21P63220 83 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 MFSD12Q6NUT3 480 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 QSOX2Q6ZRP7 698 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 LINC00471Q8N535 108 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 DEFB119Q8N690 84 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 LRRC17Q8N6Y2 441 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 SIPA1Q96FS4 1042 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 COX14Q96I36 57 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 OR2M4Q96R27 311 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 NDC1Q9BTX1 674 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 TRIM36Q9NQ86 728 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 BABAM2Q9NXR7 383 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 LIPT1Q9Y234 373 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 MED31Q9Y3C7 131 aa11.79□□□□□ -0.52
PPP4R1-202ENST00000400555 ARRDC5A6NEK1 342 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 SURF4O15260 269 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 HCN1O60741 890 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 HOXB2P14652 356 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 TEKQ02763 1124 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF322Q6U7Q0 402 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 LYPD8Q6UX82 237 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 THSD4Q6ZMP0 1018 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 SLC44A3Q8N4M1 653 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 OR2L8Q8NGY9 312 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 DIO2Q92813 273 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 BPIFA2Q96DR5 249 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 THAP7Q9BT49 309 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 SLC25A18Q9H1K4 315 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 KCNN2Q9H2S1 579 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms