RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ARPC5O15511 151 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ERVFC1P60507 584 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 NKX3-2P78367 333 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 OR8B8Q15620 311 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 LRRC26Q2I0M4 334 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 FAM78AQ5JUQ0 283 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 PNCKQ6P2M8 343 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 COX15Q7KZN9 410 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ASCC1Q8N9N2 400 aaKnown RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 MS4A4EQ96PG1 132 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 DHCR7Q9UBM7 475 aaKnown RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 NPPAP01160 153 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 AGTR1P30556 359 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 POU4F2Q12837 409 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 RAB33AQ14088 237 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 HSF5Q4G112 596 aaPredicted RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 CREB3L1Q96BA8 519 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 LRIG1Q96JA1 1093 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 UBXN10Q96LJ8 280 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 HCFC2Q9Y5Z7 792 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CHD4Q14839 1912 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 H7C2Y5 167 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CLN5O75503 358 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CNMDO75829 334 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CALCBP10092 127 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 HTR2BP41595 481 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 C17orf99Q6UX52 265 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 RFLNAQ6ZTI6 216 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 SCCPDHQ8NBX0 429 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 OR8J2Q8NGG1 315 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 LIN37Q96GY3 246 aaPredicted RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 NDUFAF4Q9P032 175 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 F3P13726 295 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ADH6P28332 368 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 HTR1EP28566 365 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CD38P28907 300 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 BDKRB2P30411 391 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 HES1Q14469 280 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 BCL2A1Q16548 175 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 FAM83FQ8NEG4 500 aaPredicted RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 NR4A3Q92570 626 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 SNX18Q96RF0 628 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ZNF223Q9UK11 482 aaPredicted RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 IFNA1P01562 189 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 EPOP01588 193 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 DEFB123Q8N688 67 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 BEST4Q8NFU0 473 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 TXNDC15Q96J42 360 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 TMEM100Q9NV29 134 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 B4GAT1O43505 415 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 SCRG1O75711 98 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 IL7P13232 177 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 CHMP24386 653 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 CLDN8P56748 225 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 CLDN17P56750 224 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 RING1Q06587 406 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 SLC35D2Q76EJ3 337 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 MAGED1Q9Y5V3 778 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 SIGLEC6O43699 453 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 TYROBPO43914 113 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 SERPINE2P07093 398 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 HOXB5P09067 269 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 HBQ1P09105 142 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 HRH2P25021 359 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 ATP4BP51164 291 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 POU3F1Q03052 451 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 STEAP3Q658P3 488 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 ZNF704Q6ZNC4 412 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 LHPPQ9H008 270 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 ZNF705FA8MVS1 300 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 PPP6CO00743 305 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 HPGDSO60760 199 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 RETP07949 1114 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 ZNF705DP0CH99 300 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 ZNF705BP0CI00 300 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 AGFG1P52594 562 aaKnown RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 CTBSQ01459 385 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 MGAT3Q09327 533 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 ISCA2Q86U28 154 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 FRMD1Q8N878 549 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 OR7G3Q8NG95 312 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 TRMT2BQ96GJ1 504 aaKnown RBP12.92□□□□□ -0.34
VAPA-202ENST00000400000 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 CEACAM7Q14002 265 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 PPP1R3BQ86XI6 285 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 SCML4Q8N228 414 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 C3orf58Q8NDZ4 430 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 DMBX1Q8NFW5 382 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 CHRDQ9H2X0 955 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 OPA3Q9H6K4 179 aa12.92□□□□□ -0.34
VAPA-202ENST00000400000 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms