RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 METTL15P1P0C7V9 234 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SMIM17P0DL12 118 aa2.57□□□□□ -2
CHD9-202ENST00000398510 AMY2BP19961 511 aa2.57□□□□□ -2
CHD9-202ENST00000398510 GSK3AP49840 483 aa2.57□□□□□ -2
CHD9-202ENST00000398510 GSK3BP49841 420 aa2.57□□□□□ -2
CHD9-202ENST00000398510 LBX1P52954 281 aa2.57□□□□□ -2
CHD9-202ENST00000398510 RPL23AP62750 156 aaKnown RBP2.57□□□□□ -2
CHD9-202ENST00000398510 RAB40BQ12829 278 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PPP1R3AQ16821 1122 aa2.57□□□□□ -2
CHD9-202ENST00000398510 VWA2Q5GFL6 755 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TIGD3Q6B0B8 471 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SFXN4Q6P4A7 337 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ZNF600Q6ZNG1 722 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PIWIL3Q7Z3Z3 882 aaKnown RBP2.57□□□□□ -2
CHD9-202ENST00000398510 FAM185AQ8N0U4 392 aa2.57□□□□□ -2
CHD9-202ENST00000398510 OR5M3Q8NGP4 307 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PPP1R13LQ8WUF5 828 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PSMF1Q92530 271 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ZNF566Q969W8 418 aa2.57□□□□□ -2
CHD9-202ENST00000398510 RELTQ969Z4 430 aa2.57□□□□□ -2
CHD9-202ENST00000398510 FAM46AQ96IP4 442 aaKnown RBP2.57□□□□□ -2
CHD9-202ENST00000398510 LCORQ96JN0 433 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 SEC22CQ9BRL7 303 aa2.57□□□□□ -2
CHD9-202ENST00000398510 DOHHQ9BU89 302 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SLC6A17Q9H1V8 727 aa2.57□□□□□ -2
CHD9-202ENST00000398510 DNAJC18Q9H819 358 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SLC27A5Q9Y2P5 690 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PRSS38A1L453 326 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ALG1L2C9J202 215 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CRTAPO75718 401 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 IFNA17P01571 189 aa2.57□□□□□ -2
CHD9-202ENST00000398510 NDUFV2P19404 249 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ORM2P19652 201 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TCN2P20062 427 aa2.57□□□□□ -2
CHD9-202ENST00000398510 DGCR6Q14129 220 aa2.57□□□□□ -2
CHD9-202ENST00000398510 GFOD2Q3B7J2 385 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ARSIQ5FYB1 569 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TMEM71Q6P5X7 295 aa2.57□□□□□ -2
CHD9-202ENST00000398510 LYPD8Q6UX82 237 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ZNF367Q7RTV3 350 aa2.57□□□□□ -2
CHD9-202ENST00000398510 GALNT5Q7Z7M9 940 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TMEM173Q86WV6 379 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 NLGN4YQ8NFZ3 816 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 OR4D6Q8NGJ1 314 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TMEM41AQ96HV5 264 aa2.57□□□□□ -2
CHD9-202ENST00000398510 GMLQ99445 158 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SMOQ99835 787 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ACAT2Q9BWD1 397 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CDCP1Q9H5V8 836 aa2.57□□□□□ -2
CHD9-202ENST00000398510 C11orf16Q9NQ32 467 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SLC39A1Q9NY26 324 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ZNF222Q9UK12 451 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CACNA1DQ01668 2161 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CCDC187A0A096LP49 1063 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TRBC2A0A5B9 178 aa2.57□□□□□ -2
CHD9-202ENST00000398510 C20orf202A1L168 122 aa2.57□□□□□ -2
CHD9-202ENST00000398510 B4DXG7 233 aa2.57□□□□□ -2
CHD9-202ENST00000398510 LDB2O43679 373 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PRAMEF10O60809 474 aa2.57□□□□□ -2
CHD9-202ENST00000398510 TMEM63AO94886 807 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PNLIPP16233 465 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CD27P26842 260 aa2.57□□□□□ -2
CHD9-202ENST00000398510 APOBEC1P41238 236 aaKnown RBP2.57□□□□□ -2
CHD9-202ENST00000398510 TGM4P49221 684 aa2.57□□□□□ -2
CHD9-202ENST00000398510 EFNA3P52797 238 aa2.57□□□□□ -2
CHD9-202ENST00000398510 DNASE1L3Q13609 305 aa2.57□□□□□ -2
CHD9-202ENST00000398510 RAB35Q15286 201 aa2.57□□□□□ -2
CHD9-202ENST00000398510 RPL22L1Q6P5R6 122 aaKnown RBP2.57□□□□□ -2
CHD9-202ENST00000398510 C6orf15Q6UXA7 325 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 MRGPREQ86SM8 312 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ADIPOR2Q86V24 386 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ADGRF3Q8IZF5 1079 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ZNF619Q8N2I2 560 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CHDHQ8NE62 594 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 OR4E2Q8NGC2 313 aa2.57□□□□□ -2
CHD9-202ENST00000398510 MAFAQ8NHW3 353 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 MTFMTQ96DP5 389 aaKnown RBP2.57□□□□□ -2
CHD9-202ENST00000398510 SCRN2Q96FV2 425 aa2.57□□□□□ -2
CHD9-202ENST00000398510 ZNF668Q96K58 619 aaPredicted RBP2.57□□□□□ -2
CHD9-202ENST00000398510 SLC46A1Q96NT5 459 aa2.57□□□□□ -2
CHD9-202ENST00000398510 RNF32Q9H0A6 362 aa2.57□□□□□ -2
CHD9-202ENST00000398510 SMOXQ9NWM0 555 aa2.57□□□□□ -2
CHD9-202ENST00000398510 KLF15Q9UIH9 416 aa2.57□□□□□ -2
CHD9-202ENST00000398510 CA14Q9ULX7 337 aa2.57□□□□□ -2
CHD9-202ENST00000398510 PCDHA9Q9Y5H5 950 aa2.57□□□□□ -2
CHD9-202ENST00000398510 WNK2Q9Y3S1 2297 aa2.57□□□□□ -2
CHD9-202ENST00000398510 M0QX08 132 aa2.56□□□□□ -2
CHD9-202ENST00000398510 NUDT21O43809 227 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 LEFTY1O75610 366 aa2.56□□□□□ -2
CHD9-202ENST00000398510 RFPL1O75677 317 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SERPINE2P07093 398 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ALOX12P18054 663 aa2.56□□□□□ -2
CHD9-202ENST00000398510 EPHA1P21709 976 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PEX2P28328 305 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SEC61A1P61619 476 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 WDR5P61964 334 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 GPR50Q13585 617 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR8B8Q15620 311 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CYP1B1Q16678 543 aa2.56□□□□□ -2
CHD9-202ENST00000398510 GGTA1PQ4G0N0 100 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms