RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 KCNJ11Q14654 390 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 LAGE3Q14657 143 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SYPL1Q16563 259 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SLC5A12Q1EHB4 618 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 CCDC57Q2TAC2 916 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SBK1Q52WX2 424 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PAN3Q58A45 887 aaKnown RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 ATAD3CQ5T2N8 411 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ATAD3BQ5T9A4 648 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SLC22A10Q63ZE4 541 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 TMEM110Q86TL2 294 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 C17orf82Q86X59 251 aaPredicted RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 NAXDQ8IW45 347 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 TBC1D21Q8IYX1 336 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ZNF683Q8IZ20 524 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 LINC01561Q8N1V8 128 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 LRRC43Q8N309 656 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 CSNK1A1LQ8N752 337 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ANKFN1Q8N957 763 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SYT14Q8NB59 555 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 OR10A7Q8NGE5 316 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ZNF606Q8WXB4 792 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 C7orf34Q96L11 122 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SIGLEC12Q96PQ1 595 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SLC6A7Q99884 636 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 C19orf24Q9BVV8 132 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ELOVL4Q9GZR5 314 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 TMEM117Q9H0C3 514 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 CUTCQ9NTM9 273 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 AATFQ9NY61 560 aaKnown RBP eCLIP2.05□□□□□ -2.08
CD47-203ENST00000398258 SPRR3Q9UBC9 169 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 GNG12Q9UBI6 72 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 NPIPA1Q9UND3 350 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 NAALAD2Q9Y3Q0 740 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PTCH1Q13635 1447 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 OR6C65A6NJZ3 312 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 H0YCG3 227 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 K7EQM0 130 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SCRG1O75711 98 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 TM7SF2O76062 418 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 KIAA0754O94854 1291 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 F10P00742 488 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 GIG44P09565 113 aaPredicted RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 RPA2P15927 270 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 CYP2B6P20813 491 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 GLRA2P23416 452 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 MAGEA9P43362 315 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 GNPDA1P46926 289 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 STARP49675 285 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 HNRNPA3P51991 378 aaKnown RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 GBX2P52951 348 aaPredicted RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 SLC25A1P53007 311 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 AP3M2P53677 418 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 IST1P53990 364 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 LIM2P55344 173 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 EWSR1Q01844 656 aaKnown RBP eCLIP2.04□□□□□ -2.08
CD47-203ENST00000398258 RGS1Q08116 209 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 CHIT1Q13231 466 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 MESDQ14696 234 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SLC10A1Q14973 349 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 MAPK6Q16659 721 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 NDUFA9Q16795 377 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 TPD52L1Q16890 204 aaPredicted RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 USH1GQ495M9 461 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 GLYR1Q49A26 553 aaPredicted RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 GGTA1PQ4G0N0 100 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SLC22A6Q4U2R8 563 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SLC25A30Q5SVS4 291 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 TTC23Q5W5X9 447 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 WSCD1Q658N2 575 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SCYL2Q6P3W7 929 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 HPS6Q86YV9 775 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 GPR65Q8IYL9 337 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 TYMSOSQ8TAI1 123 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 PNPT1Q8TCS8 783 aaKnown RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 MRAPQ8TCY5 172 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 BADQ92934 168 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SDSLQ96GA7 329 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 COQ2Q96H96 371 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 KIF16BQ96L93 1317 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 C12orf66Q96MD2 445 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 AMDHD1Q96NU7 426 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 ZNF607Q96SK3 696 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 MCHR1Q99705 422 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 TEX13BQ9BXU2 312 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SLC7A10Q9NS82 523 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 B3GNT2Q9NY97 397 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 AIPL1Q9NZN9 384 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 PIPOXQ9P0Z9 390 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 RNF14Q9UBS8 474 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SLC2A6Q9UGQ3 507 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 RIMS3Q9UJD0 308 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 SCML2Q9UQR0 700 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 MRPS33Q9Y291 106 aaKnown RBP2.04□□□□□ -2.08
CD47-203ENST00000398258 OARD1Q9Y530 152 aa2.04□□□□□ -2.08
CD47-203ENST00000398258 CROCCQ5TZA2 2017 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 PNPLA6Q8IY17 1366 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 IGHV2-70DA0A0C4DH43 119 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 LOC100131303A0A0U1RQF7 123 aa2.03□□□□□ -2.08
CD47-203ENST00000398258 GPR89AB7ZAQ6 455 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms