RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OPN5Q6U736 354 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 CLEC1AQ8NC01 280 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 CNOT9Q92600 299 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 NODALQ96S42 347 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 RTN4RQ9BZR6 473 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 LHPPQ9H008 270 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ADNPQ9H2P0 1102 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ARMC7Q9H6L4 198 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 DNAJB12Q9NXW2 375 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 SLC13A4Q9UKG4 626 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 KCNMB2Q9Y691 235 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ARGFXA6NJG6 315 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ALG1L2C9J202 215 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 TPST2O60704 377 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 DEAF1O75398 565 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 CST1P01037 141 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 HPGDP15428 266 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF136P52737 540 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 RRADP55042 308 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 CD226Q15762 336 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ACER2Q5QJU3 275 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 PRICKLE2Q7Z3G6 844 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 FAM71CQ8NEG0 241 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 OR5M3Q8NGP4 307 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 GRHL3Q8TE85 626 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 PHF10Q8WUB8 498 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ASB15Q8WXK1 588 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 CENPNQ96H22 339 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 SEMA6AQ9H2E6 1030 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 EVA1AQ9H8M9 152 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 NTN4Q9HB63 628 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 DNAJB9Q9UBS3 223 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 SLC35A3Q9Y2D2 325 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 PCNX3Q9H6A9 2034 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 J3KTA2 159 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 DNAJB5O75953 348 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 ITGA2P17301 1181 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 ITGA3P26006 1051 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 ST13P50502 369 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 SOX8P57073 446 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 RGS8P57771 180 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 SESN3P58005 492 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 SNCBQ16143 134 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 MEP1AQ16819 746 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 COLEC12Q5KU26 742 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 OR2T5Q6IEZ7 315 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 DEF8Q6ZN54 512 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 TSPYL5Q86VY4 417 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 DND1Q8IYX4 353 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 GATSQ8NAP1 163 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 OR10G3Q8NGC4 313 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 OR2T29Q8NH02 315 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 SLC35B4Q969S0 331 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 TMCO6Q96DC7 493 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 ABHD17AQ96GS6 310 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF347Q96SE7 839 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 VNN3Q9NY84 501 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 TUBD1Q9UJT1 453 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 POLHQ9Y253 713 aa15.5■□□□□ 0.07
TSPAN4-205ENST00000397406 FFAR1O14842 300 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 CASQ2O14958 399 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 DPM1O60762 260 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 CSTAP01040 98 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 GKN3PP0CG01 181 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 PRG2P13727 222 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 RHCEP18577 417 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 YAP1P46937 504 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 HOXC5Q00444 222 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 NDUFAF6Q330K2 333 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF468Q5VIY5 522 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 IL20RBQ6UXL0 311 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 MARCH3Q86UD3 253 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 GALNT16Q8N428 558 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 TMEM156Q8N614 296 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 PHOSPHO1Q8TCT1 267 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 NRG4Q8WWG1 115 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 PIP5K1AQ99755 562 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 BDH2Q9BUT1 245 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 TBL1XR1Q9BZK7 514 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 SH2D2AQ9NP31 389 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF71Q9NQZ8 489 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 STOML1Q9UBI4 398 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 ACAD8Q9UKU7 415 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 A4GNTQ9UNA3 340 aa15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 CHCHD2Q9Y6H1 151 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-205ENST00000397406 H3BNH8 94 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 OIP5O43482 229 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 ADAM11O75078 769 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 PDGFAP04085 211 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 UBTFL6P0CB48 400 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 UBL4AP11441 157 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 SFTPCP11686 197 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 PTGDSP41222 190 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 GAS1P54826 345 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 SKP2Q13309 424 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 TMEM81Q6P7N7 255 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 BEST3Q8N1M1 668 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 DHRS1Q96LJ7 313 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 MCHR1Q99705 422 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 PRR14Q9BWN1 585 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms