RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RSPO3Q9BXY4 272 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-202ENST00000397396 AGPAT4Q9NRZ5 378 aa21.56■■□□□ 1.04
TSPAN4-202ENST00000397396 DNAJB9Q9UBS3 223 aa21.56■■□□□ 1.04
TSPAN4-202ENST00000397396 APC2O95996 2303 aa21.56■■□□□ 1.04
TSPAN4-202ENST00000397396 A0A087WV48 116 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 GNGT2O14610 69 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 HCRTR2O43614 444 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 SNX4O95219 450 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 SKP2Q13309 424 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 OR2T5Q6IEZ7 315 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 COMTD1Q86VU5 262 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 TMCO5AQ8N6Q1 288 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 GATSQ8NAP1 163 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 OR2T29Q8NH02 315 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 ANGPTL4Q9BY76 406 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 PPP4R1LQ9P1A2 415 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 CACNA1AO00555 2505 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 CPAMD8Q8IZJ3 1885 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 DOCK10Q96BY6 2186 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 MED19A0JLT2 244 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 OR5H15A6NDH6 313 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 C1QTNF9BB2RNN3 333 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 FAAHO00519 579 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 CLOCKO15516 846 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 CYP7B1O75881 506 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 WDPCPO95876 746 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 C1QTNF9P0C862 333 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 P2RX1P51575 399 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 COPZ1P61923 177 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 EPS8Q12929 822 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 ZNF468Q5VIY5 522 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 BORAQ6PGQ7 559 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 PLEKHM3Q6ZWE6 761 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 PSD4Q8NDX1 1056 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 FDCSPQ8NFU4 85 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 B4GALNT2Q8NHY0 566 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 HAS2Q92819 552 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 MCHR1Q99705 422 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 TRIM2Q9C040 744 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 TMEM27Q9HBJ8 222 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 CARD8Q9Y2G2 431 aa21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 PCDHGA9Q9Y5G4 932 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-202ENST00000397396 ACACAQ13085 2346 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 IGLV3-32A0A0A0MS00 114 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 MT-ND1P03886 318 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 CCL3P10147 92 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 PGCP20142 388 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 CD96P40200 585 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 ZNF136P52737 540 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 GAS1P54826 345 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 ZNF117Q03924 483 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 RAPSNQ13702 412 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 CBFBQ13951 182 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 OR1C1Q15619 314 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 IQCCQ4KMZ1 466 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 IGFL2Q6UWQ7 119 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 PACS2Q86VP3 889 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 LACC1Q8IV20 430 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 OR4D11Q8NGI4 311 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 OR5W2Q8NH69 310 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 LRTOMTQ8WZ04 291 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 CENPNQ96H22 339 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 FRMD6Q96NE9 622 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 REEP1Q9H902 201 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 ACAD8Q9UKU7 415 aa21.54■■□□□ 1.04
TSPAN4-202ENST00000397396 FRS3O43559 492 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 OR5F1O95221 314 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 LINGO3P0C6S8 592 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 THRBP10828 461 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 PTGDSP41222 190 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 RNF144AP50876 292 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 CCR4P51679 360 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 TAS2R41P59536 307 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 ARG2P78540 354 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 PLAURQ03405 335 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 SLC34A1Q06495 639 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 NPTX1Q15818 432 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 ZNF613Q6PF04 617 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 LSMEM1Q8N8F7 131 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 PIK3C3Q8NEB9 887 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 PHF10Q8WUB8 498 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 SNRNP27Q8WVK2 155 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 ARSGQ96EG1 525 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 TMEM41AQ96HV5 264 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 SMAD5Q99717 465 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 PKP2Q99959 881 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 ANKRD19PQ9H560 264 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 GALNT9Q9HCQ5 603 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 ANKRD10Q9NXR5 420 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 STOML1Q9UBI4 398 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 RPS6KB2Q9UBS0 482 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 PCDHGB7Q9Y5F8 929 aa21.53■■□□□ 1.04
TSPAN4-202ENST00000397396 SLC25A12O75746 678 aa21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 GKN3PP0CG01 181 aa21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 ELAVL4P26378 380 aaKnown RBP21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 MASP1P48740 699 aa21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 ARHGDIAP52565 204 aa21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 SPIBQ01892 262 aa21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 ST3GAL3Q11203 375 aa21.52■■□□□ 1.03
TSPAN4-202ENST00000397396 ENTPD8Q5MY95 495 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms