RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ERVK-21P61565 698 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 PRDX1Q06830 199 aaKnown RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 SLC3A1Q07837 685 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 TGM3Q08188 693 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 C1QTNF6Q9BXI9 259 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZCCHC2Q9C0B9 1178 aaKnown RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 SPHK1Q9NYA1 384 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 STMN3Q9NZ72 180 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 IRGMA1A4Y4 181 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 RAF1P04049 648 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 WNT1P04628 370 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 TEAD1P28347 426 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 NUDT1P36639 197 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 STAT5AP42229 794 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 AP2S1P53680 142 aaPredicted RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 CDONQ4KMG0 1287 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 SLC48A1Q6P1K1 146 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 MZT2AQ6P582 158 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 OR2T33Q8NG76 320 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 TRMT10AQ8TBZ6 339 aaKnown RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 RFKQ969G6 155 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 RBP7Q96R05 134 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 OR52D1Q9H346 318 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZNF222Q9UK12 451 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 CLEC3AO75596 197 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 PCCBP05166 539 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 GYPBP06028 91 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 SNRPBP14678 240 aaKnown RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 ATF1P18846 271 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 SELENOPP49908 381 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ARHGAP19Q14CB8 494 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 GSG1Q2KHT4 349 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZNF836Q6ZNA1 936 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZNF765Q7L2R6 523 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 OR8H3Q8N146 312 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ABHD4Q8TB40 342 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 CDS1Q92903 461 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 MED28Q9H204 178 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 SCML1Q9UN30 329 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 VEGFDO43915 354 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 TPOP07202 933 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ATP6V1E1P36543 226 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 P2RY2P41231 377 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 SOX9P48436 509 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZNF697Q5TEC3 545 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 IZUMO1Q8IYV9 350 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ACBD7Q8N6N7 88 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ZNF514Q96K75 400 aaPredicted RBP12.94□□□□□ -0.34
NUP98-204ENST00000397004 AUNIPQ9H7T9 357 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 NT5DC2Q9H857 520 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 FOLH1BQ9HBA9 442 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 FLVCR2Q9UPI3 526 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 LAG3P18627 525 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 NDUFV2P19404 249 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 INPP1P49441 399 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 CDK3Q00526 305 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 SLC9A5Q14940 896 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 ZNF782Q6ZMW2 699 aaPredicted RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 CEACAM19Q7Z692 300 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 KCNN3Q9UGI6 736 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 TMEM5Q9Y2B1 443 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 TEX13CA0A0J9YWL9 993 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 SNTNA6NMZ2 147 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 GPR171O14626 319 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 PLPP2O43688 288 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 MT-ND4P03905 459 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 CFL1P23528 166 aaKnown RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 IKZF1Q13422 519 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 GALEQ14376 348 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 CEBPEQ15744 281 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 PUS10Q3MIT2 529 aaKnown RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 HEPHL1Q6MZM0 1159 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 PLEKHM3Q6ZWE6 761 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 MEPCEQ7L2J0 689 aaKnown RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 C4orf36Q96KX1 117 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 TOX2Q96NM4 488 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 SPATA5L1Q9BVQ7 753 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 OR51J1Q9H342 316 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 MAFFQ9ULX9 164 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 NPIPA5A0A0B4J1W7 369 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 IGLON5A6NGN9 336 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 NPIPA7E9PJI5 369 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 CHST10O43529 356 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 PRICKLE3O43900 615 aaPredicted RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 ADAM11O75078 769 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 NPIPA8P0DM63 369 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 PEPDP12955 493 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 GALP22466 123 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 RBMS1P29558 406 aaKnown RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 RGS8P57771 180 aaPredicted RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 RGS1Q08116 209 aa12.93□□□□□ -0.34
NUP98-204ENST00000397004 MRPL28Q13084 256 aaKnown RBP12.93□□□□□ -0.34
NUP98-204ENST00000397004 FHL1Q13642 323 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms