RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LARP4Q71RC2 724 aaKnown RBP eCLIP7.92□□□□□ -1.14
NDE1-202ENST00000396355 PUSL1Q8N0Z8 303 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 KDM8Q8N371 416 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CHST14Q8NCH0 376 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 MAL2Q969L2 176 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SMARCD1Q96GM5 515 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 TMEM169Q96HH4 297 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CAMK1GQ96NX5 476 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SORCS2Q96PQ0 1159 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 ADAM2Q99965 735 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 FN3KRPQ9HA64 309 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 TREX1Q9NSU2 369 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 ZSCAN32Q9NX65 697 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 PSORS1C1Q9UIG5 152 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SLC9B1P1A6NJY1 282 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 F5H5P2 479 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 GRM6O15303 877 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 IGF2P01344 180 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ESR1P03372 595 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 UBBP0CG47 229 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 BCKDHAP12694 445 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 PRF1P14222 555 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ATP5C1P36542 298 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 ACVR1BP36896 505 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 KIR3DL1P43629 444 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CLCN5P51795 746 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 TAS2R60P59551 318 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 UPP1Q16831 310 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 PLAG1Q6DJT9 500 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CERS6Q6ZMG9 384 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ESPNLQ6ZVH7 1005 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SSX7Q7RTT5 188 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 KLBQ86Z14 1044 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 MRPL41Q8IXM3 137 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 PELI3Q8N2H9 469 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CCDC74AQ96AQ1 378 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 MRGPRX2Q96LB1 330 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SULT4A1Q9BR01 284 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 PRKD2Q9BZL6 878 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SLC39A8Q9C0K1 460 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 NXF2Q9GZY0 626 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 OR51V1Q9H2C8 321 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 RBM7Q9Y580 266 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 PCDHA9Q9Y5H5 950 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 A3GALT2U3KPV4 340 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CDH23Q9H251 3354 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ZNF729A6NN14 1252 aaPredicted RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 PHYHO14832 338 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 GPR37L1O60883 481 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ARG1P05089 322 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 MRPL19P49406 292 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 NUBP1P53384 320 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 GEMP55040 296 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SEC61A1P61619 476 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 RPS25P62851 125 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 VAMP2P63027 116 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SURF2Q15527 256 aaPredicted RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 ZNF79Q15937 498 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 UNC50Q53HI1 259 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 EXOSC6Q5RKV6 272 aaKnown RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 ZNF678Q5SXM1 525 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CPZQ66K79 652 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 PGAP1Q75T13 922 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 HMGN2P46Q86SG4 172 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ZNF227Q86WZ6 799 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 DMRTC2Q8IXT2 367 aaPredicted RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 SEMA6DQ8NFY4 1073 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 UCN3Q969E3 161 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ZNF707Q96C28 371 aaPredicted RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 JSRP1Q96MG2 331 aaPredicted RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 SLC6A16Q9GZN6 736 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ENKD1Q9H0I2 346 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 IPPKQ9H8X2 491 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 LRTM1Q9HBL6 345 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 FZD3Q9NPG1 666 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SH3BGRL2Q9UJC5 107 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 FBXO10Q9UK96 956 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ST3GAL5Q9UNP4 418 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 RASD1Q9Y272 281 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 KLK4Q9Y5K2 254 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SPTBN4Q9H254 2564 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 LOC285095A0A1B0GVY8 99 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ANKUB1A6NFN9 424 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 A6NLC8 198 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ICOSLGO75144 302 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 NMBP08949 121 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 F3P13726 295 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 DLSTP36957 453 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 RFX3P48380 749 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CXCR4P61073 352 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 CD276Q5ZPR3 534 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ADNP2Q6IQ32 1131 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 GALNTL5Q7Z4T8 443 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 SERINC5Q86VE9 423 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 METTL27Q8N6F8 245 aaPredicted RBP7.91□□□□□ -1.14
NDE1-202ENST00000396355 GPR26Q8NDV2 337 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 NUBPLQ8TB37 319 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 TSGA13Q96PP4 275 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 ZNF700Q9H0M5 742 aa7.91□□□□□ -1.14
NDE1-202ENST00000396355 OPA3Q9H6K4 179 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms