RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CSN1S1P47710 185 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 ENTHD1Q8IYW4 607 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 ARHGAP39Q9C0H5 1083 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 UBL4AP11441 157 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 ZNF30P17039 623 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 PPP1R8Q12972 351 aaKnown RBP12.71□□□□□ -0.37
USP49-203ENST00000394253 ZNF154Q13106 437 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 IL34Q6ZMJ4 242 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 RHCGQ9UBD6 479 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 MANBAO00462 879 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 PHOX2AO14813 284 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 CDK4P11802 303 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 HOXA11P31270 313 aaPredicted RBP12.71□□□□□ -0.37
USP49-203ENST00000394253 RNLSQ5VYX0 342 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 IL20RBQ6UXL0 311 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 LINGO4Q6UY18 593 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 OR10Q1Q8NGQ4 319 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 C8orf33Q9H7E9 229 aaPredicted RBP12.71□□□□□ -0.37
USP49-203ENST00000394253 TMEM94Q12767 1356 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 PLSCR5A0PG75 271 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 ANKRD63C9JTQ0 380 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 ADRB1P08588 477 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 OR12D1P0DN82 309 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 ARHGDIGQ99819 225 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 TM7SF3Q9NS93 570 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 V9GYS6 101 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 TMEM150BA6NC51 233 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 B4GALT2O60909 372 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 APLNRP35414 380 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 KIAA0141Q14154 515 aaPredicted RBP12.71□□□□□ -0.38
USP49-203ENST00000394253 GRB7Q14451 532 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 SPANXN4Q5MJ08 99 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 CORO6Q6QEF8 472 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 OR2M7Q8NG81 312 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 PPTC7Q8NI37 304 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 NDNFQ8TB73 568 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.38
USP49-203ENST00000394253 TMEM82A0PJX8 343 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 TSPAN6O43657 245 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 NIPSNAP2O75323 286 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 PGCP20142 388 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 EBPQ15125 230 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 TMEM183BQ1AE95 376 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 FAM214AQ32MH5 1076 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 IL31RAQ8NI17 732 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 EHFQ9NZC4 300 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 MYOTQ9UBF9 498 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 FBXW11Q9UKB1 542 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 TGM4P49221 684 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 CLCNKAP51800 687 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 RAB33AQ14088 237 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 APOOLQ6UXV4 268 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 LRRC25Q8N386 305 aaPredicted RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 WFIKKN2Q8TEU8 576 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 SLCO2A1Q92959 643 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 SCLYQ96I15 445 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 TAC3Q9UHF0 121 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 PCDHGC4Q9Y5F7 938 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 TRBV23OR9-2A0A075B6M9 112 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 RCCD1A6NED2 376 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 CRABP1P29762 137 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 OR5L2Q8NGL0 311 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 PSMG2Q969U7 264 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 C1orf198Q9H425 327 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 KCNMB3Q9NPA1 279 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 GPR160Q9UJ42 338 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 LRIT2A6NDA9 550 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 MAFO75444 373 aaPredicted RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 CXCL14O95715 111 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 AADACP22760 399 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 SELPLGQ14242 412 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 FAM69BQ5VUD6 431 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 RANGRFQ9HD47 186 aaPredicted RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 FZD10Q9ULW2 581 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 OR6C68A6NDL8 312 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 PFKMP08237 780 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 DEFA4P12838 97 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 BAXQ07812 192 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 ZNF718Q3SXZ3 478 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
USP49-203ENST00000394253 MINDY1Q8N5J2 469 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 MARC2Q969Z3 335 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 RASD2Q96D21 266 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 HRASLSQ9HDD0 168 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 LTN1O94822 1766 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 OR51F1A6NGY5 319 aa12.7□□□□□ -0.38
USP49-203ENST00000394253 CCKARP32238 428 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms