RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 ZNF117Q03924 483 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 PPP1R8Q12972 351 aaKnown RBP22.21■■□□□ 1.15
LRFN4-202ENST00000393952 SKP2Q13309 424 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 GANABQ14697 944 aaKnown RBP22.21■■□□□ 1.15
LRFN4-202ENST00000393952 TRIP10Q15642 601 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 CBLN3Q6UW01 205 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 LINC00696Q6ZRV3 163 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 RANBP3LQ86VV4 465 aaPredicted RBP22.21■■□□□ 1.15
LRFN4-202ENST00000393952 CYP4Z1Q86W10 505 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 CYP4Z2PQ8N1L4 340 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 ICA1LQ8NDH6 482 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 SH3YL1Q96HL8 342 aaPredicted RBP22.21■■□□□ 1.15
LRFN4-202ENST00000393952 BDH2Q9BUT1 245 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 SH2D2AQ9NP31 389 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 A4GNTQ9UNA3 340 aa22.21■■□□□ 1.15
LRFN4-202ENST00000393952 CPSF4LA6NMK7 179 aaKnown RBP22.2■■□□□ 1.14
LRFN4-202ENST00000393952 AP3D1O14617 1153 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 F10P00742 488 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 CCL3P10147 92 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 HTR2AP28223 471 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 ACAA2P42765 397 aaKnown RBP22.2■■□□□ 1.14
LRFN4-202ENST00000393952 CCL11P51671 97 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 GAS1P54826 345 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 SPIBQ01892 262 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 PIN1Q13526 163 aaPredicted RBP22.2■■□□□ 1.14
LRFN4-202ENST00000393952 CCDC81Q6ZN84 652 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 RTL4Q6ZR62 310 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 ZNF550Q7Z398 422 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 ZNF605Q86T29 641 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 TMCO5AQ8N6Q1 288 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 NRG4Q8WWG1 115 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 SLC35B4Q969S0 331 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 LAT2Q9GZY6 243 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 ABI3Q9P2A4 366 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 STOML1Q9UBI4 398 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 TESQ9UGI8 421 aaKnown RBP22.2■■□□□ 1.14
LRFN4-202ENST00000393952 ACAD8Q9UKU7 415 aa22.2■■□□□ 1.14
LRFN4-202ENST00000393952 CNOT11Q9UKZ1 510 aaKnown RBP22.2■■□□□ 1.14
LRFN4-202ENST00000393952 URB1O60287 2271 aaKnown RBP22.19■■□□□ 1.14
LRFN4-202ENST00000393952 SAC3D1A6NKF1 404 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 ENDOUP21128 410 aaKnown RBP22.19■■□□□ 1.14
LRFN4-202ENST00000393952 RYKP34925 604 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 CASP3P42574 277 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 CDH12P55289 794 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 RPP38P78345 283 aaKnown RBP22.19■■□□□ 1.14
LRFN4-202ENST00000393952 PRAMEF20Q5VT98 475 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 AGAP7PQ5VUJ5 663 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 LPCAT4Q643R3 524 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 GPALPP1Q8IXQ4 340 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 ZNF440Q8IYI8 595 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 PAQR8Q8TEZ7 354 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 DUSP19Q8WTR2 217 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 SGCZQ96LD1 299 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 PRRC1Q96M27 445 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 AGAP4Q96P64 663 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 SECISBP2Q96T21 854 aaKnown RBP22.19■■□□□ 1.14
LRFN4-202ENST00000393952 KLHDC3Q9BQ90 382 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 RASSF4Q9H2L5 321 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 EXOSC3Q9NQT5 275 aaKnown RBP22.19■■□□□ 1.14
LRFN4-202ENST00000393952 KCNMB2Q9Y691 235 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 U3KQV3 271 aa22.19■■□□□ 1.14
LRFN4-202ENST00000393952 CNTRLQ7Z7A1 2325 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 CASQ2O14958 399 aaPredicted RBP22.18■■□□□ 1.14
LRFN4-202ENST00000393952 RRP8O43159 456 aaKnown RBP22.18■■□□□ 1.14
LRFN4-202ENST00000393952 HCRTR2O43614 444 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 EIF4E2O60573 245 aaKnown RBP22.18■■□□□ 1.14
LRFN4-202ENST00000393952 PEX2P28328 305 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 CYB561P49447 251 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 CCR4P51679 360 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 OC90Q02509 493 aaPredicted RBP22.18■■□□□ 1.14
LRFN4-202ENST00000393952 EPS8Q12929 822 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 FOXD4Q12950 439 aaPredicted RBP22.18■■□□□ 1.14
LRFN4-202ENST00000393952 ENTPD8Q5MY95 495 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 SLC22A10Q63ZE4 541 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 ISLR2Q6UXK2 745 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 PLEKHM3Q6ZWE6 761 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 MDGA2Q7Z553 956 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 TMEM179BQ7Z7N9 219 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 ZNF227Q86WZ6 799 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 MISPQ8IVT2 679 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 OSBPL11Q9BXB4 747 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 REEP1Q9H902 201 aa22.18■■□□□ 1.14
LRFN4-202ENST00000393952 SAMHD1Q9Y3Z3 626 aaKnown RBP22.18■■□□□ 1.14
LRFN4-202ENST00000393952 IGF2RP11717 2491 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 ADAMDEC1O15204 470 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 GMFGO60234 142 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 DPM1O60762 260 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 FMO6PO60774 539 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 E2F6O75461 281 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 WDPCPO95876 746 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 CD96P40200 585 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 TAS2R41P59536 307 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 OR52J3Q8NH60 311 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 ZNF559Q9BR84 538 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 UTP23Q9BRU9 249 aaKnown RBP22.17■■□□□ 1.14
LRFN4-202ENST00000393952 ZNF552Q9H707 407 aaPredicted RBP22.17■■□□□ 1.14
LRFN4-202ENST00000393952 NMNAT1Q9HAN9 279 aaPredicted RBP22.17■■□□□ 1.14
LRFN4-202ENST00000393952 ACER3Q9NUN7 267 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 PLA2G3Q9NZ20 509 aa22.17■■□□□ 1.14
LRFN4-202ENST00000393952 OAZ3Q9UMX2 235 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms