RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 NCF4Q15080 339 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TRIP6Q15654 476 aaKnown RBP7.95□□□□□ -1.14
TDP1-203ENST00000393454 KLHL26Q53HC5 615 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 DESI1Q6ICB0 168 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 C1orf94Q6P1W5 598 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TMEM205Q6UW68 189 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 GRAMD2AQ8IUY3 354 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 NRMQ8IXM6 262 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 DEPDC4Q8N2C3 294 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TMCO5AQ8N6Q1 288 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 NFAM1Q8NET5 270 aaPredicted RBP7.95□□□□□ -1.14
TDP1-203ENST00000393454 PRSS33Q8NF86 280 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TOR1AIP2Q8NFQ8 470 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 OMA1Q96E52 524 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 HSPBAP1Q96EW2 488 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 VMP1Q96GC9 406 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TAAR9Q96RI9 348 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TRIM2Q9C040 744 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 KRCC1Q9NPI7 259 aaPredicted RBP7.95□□□□□ -1.14
TDP1-203ENST00000393454 SELENONQ9NZV5 590 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 CNIH4Q9P003 139 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 REV1Q9UBZ9 1251 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 BLOC1S6Q9UL45 172 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 RNF6Q9Y252 685 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 SLC35A3Q9Y2D2 325 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 PTGES3LE9PB15 166 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 KPNA4O00629 521 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 TO15178 435 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 PIP5K1CO60331 668 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 TBXA2RP21731 343 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 ABCD3P28288 659 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 ACAA2P42765 397 aaKnown RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 GPR4P46093 362 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 RPL5P46777 297 aaKnown RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 CDC42P60953 191 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 COPZ1P61923 177 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 COX10Q12887 443 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 APOFQ13790 326 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 ZNF613Q6PF04 617 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 FAM198BQ6UWH4 519 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 C6orf15Q6UXA7 325 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 C16orf47Q6ZP98 133 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 MBOAT2Q6ZWT7 520 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 LSRQ86X29 649 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 CCDC71Q8IV32 467 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 ENTHD1Q8IYW4 607 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 APCDD1LQ8NCL9 501 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 GPA33Q99795 319 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 WDR77Q9BQA1 342 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 ZPBPQ9BS86 351 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 SEMA4CQ9C0C4 833 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 ZBTB20Q9HC78 741 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 ZNF223Q9UK11 482 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 PADI1Q9ULC6 663 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 A0A1B0GWA3 101 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 M0R129 80 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 WWP2O00308 870 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 SLC1A7O00341 560 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 XPNPEP2O43895 674 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 GMFGO60234 142 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 TSPAN2O60636 221 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 CYC1P08574 325 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 LINGO3P0C6S8 592 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 UBL4AP11441 157 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 CRHBPP24387 322 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 FOLR3P41439 243 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 HLCSP50747 726 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 NR1H2P55055 460 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 SLC26A5P58743 744 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 TUBA4AP68366 448 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 CD226Q15762 336 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 HES3Q5TGS1 186 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 CDCP2Q5VXM1 449 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 SATL1Q86VE3 508 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 P3H2Q8IVL5 708 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 ZNF440Q8IYI8 595 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 ZNF441Q8N8Z8 693 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 OR5L2Q8NGL0 311 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 OR5M3Q8NGP4 307 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 TMEM239Q8WW34 195 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 LIN37Q96GY3 246 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 DEPDC7Q96QD5 511 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 PRSS27Q9BQR3 290 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 TBL1XR1Q9BZK7 514 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 TUBA8Q9NY65 449 aaPredicted RBP7.94□□□□□ -1.14
TDP1-203ENST00000393454 SCN3BQ9NY72 215 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 CARD8Q9Y2G2 431 aa7.94□□□□□ -1.14
TDP1-203ENST00000393454 CCDC187A0A096LP49 1063 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 A0A0B4J2E0 115 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.93□□□□□ -1.14
TDP1-203ENST00000393454 A0A1B0GX12 115 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZAR1LA6NP61 321 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 E9PQ18 207 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 GNB5O14775 395 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 PLD2O14939 933 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZNF264O43296 627 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 FAM20BO75063 409 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 LRP3O75074 770 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ADAM11O75078 769 aa7.93□□□□□ -1.14
TDP1-203ENST00000393454 ZFAND5O76080 213 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms