RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 ABCC13Q9NSE7 274 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 TMEM140Q9NV12 185 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 FBXO34Q9NWN3 711 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 DUS2Q9NX74 493 aaKnown RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 P4HTMQ9NXG6 502 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 ZDHHC3Q9NYG2 299 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 MYOTQ9UBF9 498 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 P2RX2Q9UBL9 471 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 IL19Q9UHD0 177 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 ENPP5Q9UJA9 477 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 FBXL4Q9UKA2 621 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 TCRBV7S3A2A0A539 114 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 ZNF736B4DX44 427 aaPredicted RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 MSTNO14793 375 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 SLC31A1O15431 190 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 AOC2O75106 756 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 SERPINA5P05154 406 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 HNRNPA1P09651 372 aaKnown RBP eCLIP3.09□□□□□ -1.91
PHF3-202ENST00000393387 SFTA3P0C7M3 94 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 AOAHP28039 575 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 CCKARP32238 428 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 GABRA4P48169 554 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 RAB13P51153 203 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 SEC13P55735 322 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 RPL26P61254 145 aaKnown RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 ERVK-16P61578 105 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 CDK18Q07002 472 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 OLIG2Q13516 323 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 NNATQ16517 81 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 HNRNPA1L2Q32P51 320 aaKnown RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 EOGTQ5NDL2 527 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 LCN15Q6UWW0 184 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 KLHDC1Q8N7A1 406 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 C12orf29Q8N999 325 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 OR5AK2Q8NH90 309 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 PHOSPHO1Q8TCT1 267 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 OIT3Q8WWZ8 545 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 IP6K1Q92551 441 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 MIB2Q96AX9 1013 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 FAM71F1Q96KD3 344 aaPredicted RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 LRR1Q96L50 414 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 UBXN10Q96LJ8 280 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 STACQ99469 402 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 SLC38A3Q99624 504 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 FDXACB1Q9BRP7 624 aaPredicted RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 C11orf49Q9H6J7 331 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 KLRF1Q9NZS2 232 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 CPNE7Q9UBL6 633 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 ZNF629Q9UEG4 869 aaPredicted RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 MIOXQ9UGB7 285 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 B3GNT3Q9Y2A9 372 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 SNX11Q9Y5W9 270 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 TCOF1Q13428 1488 aaKnown RBP3.09□□□□□ -1.91
PHF3-202ENST00000393387 ZNF609O15014 1411 aa3.09□□□□□ -1.91
PHF3-202ENST00000393387 CXorf49A8MYA2 514 aaPredicted RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 PMM2O15305 246 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 DNPH1O43598 174 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 APBA3O96018 575 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 CYB5R3P00387 301 aaPredicted RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 HOXB8P17481 243 aaPredicted RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 ITGB8P26012 769 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 PSMB3P49720 205 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 PGGT1BP53609 377 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 ERVFRD-1P60508 538 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 RPL11P62913 178 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 HIST1H3AP68431 136 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 ADARB1P78563 741 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 MEF2AQ02078 507 aaPredicted RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 SPHARQ15513 63 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 OR7A5Q15622 319 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 SMAD2Q15796 467 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 TAZQ16635 292 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 RPS26P11Q5JNZ5 115 aaPredicted RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 EARS2Q5JPH6 523 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 ABLIM2Q6H8Q1 611 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 SIGIRRQ6IA17 410 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 STEAP1BQ6NZ63 245 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 TMEM71Q6P5X7 295 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 DNM1P34Q6PK57 102 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 TSEN54Q7Z6J9 526 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 CDH26Q8IXH8 852 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 ZNF610Q8N9Z0 462 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 CCDC71LQ8N9Z2 235 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 OR52E2Q8NGJ4 325 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 OR2G3Q8NGZ4 309 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 SUSD6Q92537 303 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 ALG3Q92685 438 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 P2RY11Q96G91 374 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 RPL10LQ96L21 214 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 FCRL3Q96P31 734 aaPredicted RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 OSMRQ99650 979 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 CCM2Q9BSQ5 444 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 SAP130Q9H0E3 1048 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 AAASQ9NRG9 546 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 AGO1Q9UL18 857 aaKnown RBP3.09□□□□□ -1.92
PHF3-202ENST00000393387 RAI2Q9Y5P3 530 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 BACE2Q9Y5Z0 518 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 NEO1Q92859 1461 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 SMARCA4P51532 1647 aa3.09□□□□□ -1.92
PHF3-202ENST00000393387 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms