RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 METTL7AQ9H8H3 244 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 USP22Q9UPT9 525 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 TCRBV3S1A0A5B6 114 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 PINLYPA6NC86 204 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 CRYABP02511 175 aaKnown RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 FAM87AP0C7U9 286 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 CHMP24386 653 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 MEOX1P50221 254 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 RPS26P11Q5JNZ5 115 aaPredicted RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 GLYATQ6IB77 296 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 FAM109AQ8N4B1 249 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 FAM13CQ8NE31 585 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 TTTY12Q9BZ98 90 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 TBL1XR1Q9BZK7 514 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 ADA2Q9NZK5 511 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 CSAG2Q9Y5P2 127 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 CFAP47Q6ZTR5 3102 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 SUSD5O60279 629 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 LINGO3P0C6S8 592 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 TDGF1P3P51864 188 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 B3GALT5-AS1P59052 145 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 MXRA7P84157 204 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 DMTNQ08495 405 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 BCL2A1Q16548 175 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 ZNF311Q5JNZ3 666 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 DESI1Q6ICB0 168 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 LINC00114Q6XXX2 140 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 MARCH3Q86UD3 253 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 B4GALNT2Q8NHY0 566 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 OTUB1Q96FW1 271 aaPredicted RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 A0A0G2JMM0 328 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 A0A1W2PPB8 328 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 A0A1W2PRS3 328 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 CFAP73A6NFT4 308 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 KIR3DP1A8MWS1 328 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 NDUFB5O43674 189 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 CASP9P55211 416 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 CBFBQ13951 182 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 GPR68Q15743 365 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 CYBRD1Q53TN4 286 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 MRPL2Q5T653 305 aaKnown RBP12.07□□□□□ -0.48
USP44-202ENST00000393091 C19orf48Q6RUI8 117 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 SLC22A16Q86VW1 577 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 OR6S1Q8NH40 331 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 SLX1AQ9BQ83 275 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 ARHGAP9Q9BRR9 750 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 ACER3Q9NUN7 267 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 HRH3Q9Y5N1 445 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 HTR3EA5X5Y0 456 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 RASAL1O95294 804 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 HTR3AP46098 478 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 OR1J4Q8NGS1 313 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 ZNF559Q9BR84 538 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 TRIM15Q9C019 465 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 ANKRD19PQ9H560 264 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 ADPRHL2Q9NX46 363 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 SLC7A8Q9UHI5 535 aa12.07□□□□□ -0.48
USP44-202ENST00000393091 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 M0QX08 132 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 LYPD3O95274 346 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 GFRA1P56159 465 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 NPTX1Q15818 432 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 PLPPR5Q32ZL2 321 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 KRTCAP3Q53RY4 240 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 COMTD1Q86VU5 262 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 VRK2Q86Y07 508 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 GTPBP8Q8N3Z3 284 aaPredicted RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 C7orf34Q96L11 122 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 MRGPRX4Q96LA9 322 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 B4GALT7Q9UBV7 327 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 ZIC3O60481 467 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 IL7RP16871 459 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 MS4A2Q01362 244 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 ZSCAN26Q16670 478 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 ZNF613Q6PF04 617 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 ZNF605Q86T29 641 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP44-202ENST00000393091 KLRF1Q9NZS2 232 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 PPP4R1LQ9P1A2 415 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 POMPQ9Y244 141 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 AQP7O14520 342 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 CDC40O60508 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP44-202ENST00000393091 FESP07332 822 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 CLK1P49759 484 aaKnown RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 OC90Q02509 493 aaPredicted RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 KCNC4Q03721 635 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 FKBP9P1Q75LS8 142 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 CLIP4Q8N3C7 705 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 GEMIN6Q8WXD5 167 aaKnown RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 PYURFQ96I23 114 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 TAAR6Q96RI8 345 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 THTPAQ9BU02 230 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 CACYBPQ9HB71 228 aaKnown RBP12.06□□□□□ -0.48
USP44-202ENST00000393091 SEC14L3Q9UDX4 400 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms