RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CRTAPO75718 401 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GRAP2O75791 330 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PSMD10O75832 226 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IGHG2P01859 326 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IGHG4P01861 327 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ASLP04424 464 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TDGF1P13385 188 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 LAMP2P13473 410 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IL1RNP18510 177 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 XRCC1P18887 633 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OMGP23515 440 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CALRP27797 417 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TMOD1P28289 359 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 COPB2P35606 906 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TCF7P36402 384 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 EPS15P42566 896 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GABRA4P48169 554 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CSNK1A1P48729 337 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PPM1FP49593 454 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ACADVLP49748 655 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TDGF1P3P51864 188 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PLK1P53350 603 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PPP1CBP62140 327 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RAP1AP62834 184 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IL1RL1Q01638 556 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CDC16Q13042 620 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GPR50Q13585 617 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ALKBH1Q13686 389 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FAM50AQ14320 339 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 INAQ16352 499 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 KRTAP19-5Q3LI72 72 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 BRDTQ58F21 947 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RNASE13Q5GAN3 156 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 KHDC1LQ5JSQ8 128 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SPATA31B1PQ5VZV4 182 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FAM219BQ5XKK7 198 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OR4C11Q6IEV9 310 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 Q6ZQT7 251 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ADAMTS13Q76LX8 1427 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CHST3Q7LGC8 479 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC16A14Q7RTX9 510 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TBC1D26Q86UD7 250 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TRIM69Q86WT6 500 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MICU3Q86XE3 530 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SPATS2Q86XZ4 545 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C9orf40Q8IXQ3 194 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 AMN1Q8IY45 258 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PNKDQ8N490 385 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 XXYLT1Q8NBI6 393 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ABCF1Q8NE71 845 aaKnown RBP eCLIP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OR13J1Q8NGT2 312 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FNDC8Q8TC99 324 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IRGQQ8WZA9 623 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 HAVCR1Q96D42 359 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC25A44Q96H78 314 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CALR3Q96L12 384 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 UBE2E2Q96LR5 201 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 B9D2Q9BPU9 175 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PORCNQ9H237 461 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FNDC4Q9H6D8 234 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 METTL17Q9H7H0 456 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FAM60AQ9NP50 221 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 WASH6PQ9NQA3 447 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FAM207AQ9NSI2 230 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SNTG2Q9NY99 539 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF226Q9NYT6 803 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ACTR10Q9NZ32 417 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CLCF1Q9UBD9 225 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PARP2Q9UGN5 583 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PCSK1NQ9UHG2 260 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC12A6Q9UHW9 1150 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 NPIPA1Q9UND3 350 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TNIKQ9UKE5 1360 aa-2.89□□□□□ -2.87
RNU6-1340P-201ENST00000384438 BIVM-ERCC5R4GMW8 1640 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ADGRB2O60241 1585 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 A0A087WZ39 114 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 A0A087X0B3 334 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ARRDC5A6NEK1 342 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 NKX6-3A6NJ46 265 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF724A8MTY0 619 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C12orf71A8MTZ7 269 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C5orf67F2Z3F1 127 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 H0YHG0 523 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 LECT2O14960 151 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ATP2A1O14983 1001 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZBTB5O15062 677 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 THAP12O43422 761 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF737O75373 536 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CSDE1O75534 798 aaKnown RBP-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TM7SF2O76062 418 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ADAP00813 363 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MT-ND2P03891 347 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SERPINF2P08697 491 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PCNAP12004 261 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FOSL2P15408 326 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ERCC3P19447 782 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TPSB2P20231 275 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 NTF3P20783 257 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IGFBP5P24593 272 aa-2.9□□□□□ -2.87
RNU6-1340P-201ENST00000384438 UCP1P25874 307 aa-2.9□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms