RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 NPIPA1Q9UND3 350 aa4.17□□□□□ -1.74
RNU6-40P-201ENST00000384254 L3MBTL1Q9Y468 752 aa4.17□□□□□ -1.74
RNU6-40P-201ENST00000384254 POGZQ7Z3K3 1410 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 SYNJ2BP-COX16A0A087WUM0 186 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 SRRM5B3KS81 715 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 B4DXG7 233 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 EFNA2O43921 213 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 UGT2B17O75795 530 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 HSMCR30P0CW71 290 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 CPN1P15169 458 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 EFNA3P52797 238 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 ARFIP1P53367 373 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 RAB40BQ12829 278 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 ASAH1Q13510 395 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 GSG1Q2KHT4 349 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 SLC22A10Q63ZE4 541 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 PYHIN1Q6K0P9 492 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 MOB3BQ86TA1 216 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 SERPINA9Q86WD7 417 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 OR2T3Q8NH03 318 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 SLC5A11Q8WWX8 675 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 SIGLEC12Q96PQ1 595 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 CCT8L2Q96SF2 557 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 CCT7Q99832 543 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 TUBGCP2Q9BSJ2 902 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 GORASP2Q9H8Y8 452 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 XPO7Q9UIA9 1087 aaKnown RBP4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 NAALAD2Q9Y3Q0 740 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 PPIAL4AQ9Y536 164 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 MAB21L2Q9Y586 359 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 COL5A2P05997 1499 aaPredicted RBP4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 ATAD2BQ9ULI0 1458 aa4.16□□□□□ -1.74
RNU6-40P-201ENST00000384254 IGKV3D-20A0A0C4DH25 116 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 PCP4L1A6NKN8 68 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FAM220BPB1ANY3 271 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 H3BMQ9 156 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FCN1O00602 326 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 OR7A17O14581 309 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 SPAG6O75602 509 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 ZNF44P15621 663 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 HNF1AP20823 631 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 GATA2P23769 480 aaPredicted RBP4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 GDF1P27539 372 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 PRKAR2BP31323 418 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 ST3GAL3Q11203 375 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 IL24Q13007 206 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 CHIT1Q13231 466 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 LAGE3Q14657 143 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 GANABQ14697 944 aaKnown RBP4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 PAGE2BQ5JRK9 111 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 C10orf120Q5SQS8 335 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 SPATA46Q5T0L3 261 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 OR5M10Q6IEU7 315 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FAM71F2Q6NXP2 309 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 CCDC80Q76M96 950 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 MARCH9Q86YJ5 346 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 CCDC50Q8IVM0 306 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 LYG1Q8N1E2 194 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FAM3CQ92520 227 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 RPL3LQ92901 407 aaKnown RBP4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 PSMG2Q969U7 264 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FOXN4Q96NZ1 517 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 RANBP9Q96S59 729 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 DPH7Q9BTV6 452 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 VCX2Q9H322 139 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 SMPD3Q9NY59 655 aaPredicted RBP4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 COX16Q9P0S2 106 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FLVCR1Q9Y5Y0 555 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 IKBKGQ9Y6K9 419 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 FRMPD4Q14CM0 1322 aa4.15□□□□□ -1.75
RNU6-40P-201ENST00000384254 SMIM28A0A1B0GU29 152 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 DHRS7CA6NNS2 312 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 G3V4G9 280 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 RIPK2O43353 540 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 THY1P04216 161 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 DBTP11182 482 aaKnown RBP4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 CXCL6P80162 114 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 KRTAP1-1Q07627 177 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 MXD4Q14582 209 aaPredicted RBP4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 SLC5A12Q1EHB4 618 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 EXOC3L2Q2M3D2 409 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 PAN3Q58A45 887 aaKnown RBP4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 ZNF658Q5TYW1 1059 aaPredicted RBP4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 BAIAP2L2Q6UXY1 529 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 TPRA1Q86W33 373 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 SLC38A6Q8IZM9 456 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 GPD1LQ8N335 351 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 KLHL30-AS1Q8NEE0 82 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 EDEM2Q9BV94 578 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 ZNF385DQ9H6B1 395 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 LRRC40Q9H9A6 602 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 PCSK1NQ9UHG2 260 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 LCMT1Q9UIC8 334 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 ZNF221Q9UK13 617 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 SLCO1B1Q9Y6L6 691 aa4.14□□□□□ -1.75
RNU6-40P-201ENST00000384254 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.13□□□□□ -1.75
RNU6-40P-201ENST00000384254 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.13□□□□□ -1.75
RNU6-40P-201ENST00000384254 METTL21EPA6NDL7 271 aa4.13□□□□□ -1.75
RNU6-40P-201ENST00000384254 TMEM110-MUSTN1A8MSY1 372 aa4.13□□□□□ -1.75
RNU6-40P-201ENST00000384254 BTN3A3O00478 584 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms