RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SLC29A3Q9BZD2 475 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ZNF217O75362 1048 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CD70P32970 193 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 UGT3A2Q3SY77 523 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 OR11L1Q8NGX0 322 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 MITD1Q8WV92 249 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 SLC38A1Q9H2H9 487 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TCEAL2Q9H3H9 227 aaPredicted RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 SMOC2Q9H3U7 446 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 NKX1-2Q9UD57 310 aaPredicted RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 TMEM14AQ9Y6G1 99 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 PIPP12273 146 aaPredicted RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 M6PRP20645 277 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CHATP28329 748 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 PKLRP30613 574 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TIA1P31483 386 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHD3-203ENST00000380358 PTGIRP43119 386 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 STC1P52823 247 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TGFBR3Q03167 851 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 MFSD6LQ8IWD5 586 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 OR9Q2Q8NGE9 314 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 OR52R1Q8NGF1 315 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 OR5L1Q8NGL2 311 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 FOXQ1Q9C009 403 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CHD1O14646 1710 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TET3O43151 1660 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 OR6C65A6NJZ3 312 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 H3BMQ9 156 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 HTRA2O43464 458 aaPredicted RBP11.71□□□□□ -0.53
CHD3-203ENST00000380358 SNCAP37840 140 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 RBMS3Q6XE24 437 aaKnown RBP11.71□□□□□ -0.53
CHD3-203ENST00000380358 FOXRED1Q96CU9 486 aaPredicted RBP11.71□□□□□ -0.53
CHD3-203ENST00000380358 A0A1W2PP18 115 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 TSPAN11A1L157 253 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 H3BNC9 293 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 B3GALNT1O75752 331 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 FAM72CH0Y354 149 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 ARHGAP11BQ3KRB8 267 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 FAM72AQ5TYM5 149 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 FAM72DQ6L9T8 149 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 TRILQ7L0X0 811 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 FAM72BQ86X60 149 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 TEX26Q8N6G2 289 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 ZNRF4Q8WWF5 429 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 CNOT9Q92600 299 aaKnown RBP11.71□□□□□ -0.53
CHD3-203ENST00000380358 NMES1Q9C002 83 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 MVB12BQ9H7P6 319 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 NGBQ9NPG2 151 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 PRAMEF11O60813 436 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 OR7C1O76099 320 aaPredicted RBP11.71□□□□□ -0.53
CHD3-203ENST00000380358 CRYBA1P05813 215 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 BPIP17213 487 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 CLDN17P56750 224 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 ZNF705AQ6ZN79 300 aaPredicted RBP11.71□□□□□ -0.53
CHD3-203ENST00000380358 SSX9Q7RTT3 188 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 CDS1Q92903 461 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 INPP5KQ9BT40 448 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 TM7SF3Q9NS93 570 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 EHFQ9NZC4 300 aa11.71□□□□□ -0.53
CHD3-203ENST00000380358 NWD1Q149M9 1564 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 AQP12BA6NM10 295 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 OR5K4A6NMS3 321 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 H7C1C5 153 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 FAAHO00519 579 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 PIGRP01833 764 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 ARSBP15848 533 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 LCN6P62502 163 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 MSS51Q4VC12 460 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 TIGD3Q6B0B8 471 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 PSAPL1Q6NUJ1 521 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 ZNF419Q96HQ0 510 aaPredicted RBP11.71□□□□□ -0.54
CHD3-203ENST00000380358 BARX1Q9HBU1 254 aaPredicted RBP11.71□□□□□ -0.54
CHD3-203ENST00000380358 SEC14L4Q9UDX3 406 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 NOSIPQ9Y314 301 aaKnown RBP11.71□□□□□ -0.54
CHD3-203ENST00000380358 GABARAPH6UMI1 98 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 HS3ST1O14792 307 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 GABARAPO95166 117 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 ABHD18Q0P651 414 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 SFT2D3Q587I9 215 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 NLRP8Q86W28 1048 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 MKXQ8IYA7 352 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 SUMF1Q8NBK3 374 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 DEFB108BQ8NET1 73 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 ACOT11Q8WXI4 607 aaPredicted RBP11.71□□□□□ -0.54
CHD3-203ENST00000380358 PINX1Q96BK5 328 aaKnown RBP11.71□□□□□ -0.54
CHD3-203ENST00000380358 OR6C2Q9NZP2 312 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 LRRC42Q9Y546 428 aa11.71□□□□□ -0.54
CHD3-203ENST00000380358 RFXAPO00287 272 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 F13BP05160 661 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 UBL4AP11441 157 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 PLA1AQ53H76 456 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TMEM248Q9NWD8 314 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 OARD1Q9Y530 152 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 E7ESA3 106 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 PLSCR1O15162 318 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 HBQ1P09105 142 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms